Gene annotation
Transcriptome id Sobic.002G377700.1
Synonym Sb02g039480
Functional annotation caltractin, putative, expressed
UniProt C5X2F8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g42790.1 : caltractin, putative, expressed
MaizeGDB (Corn) Zm00025a048778
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238000 expansin precursor, putative, expressed -
2 Sobic.001G238200 expansin precursor, putative, expressed -
3 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
4 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
5 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
6 Sobic.003G319400 receptor protein kinase, putative, expressed -
7 Sobic.009G219200 expressed protein -
8 Sobic.004G306900 amino acid transporter, putative, expressed -
9 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G083500 O-methyltransferase, putative, expressed -
11 Sobic.001G237800 expansin precursor, putative, expressed -
12 Sobic.001G438200 expressed protein -
13 Sobic.003G064800 dirigent, putative, expressed -
14 Sobic.003G140700 peroxidase precursor, putative, expressed -
15 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
16 Sobic.010G031700 thaumatin, putative, expressed -
17 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.009G160800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G377700 Sobic002G377700 Sobic001G238000 Sobic001G238000 Sobic002G377700--Sobic001G238000 Sobic001G238200 Sobic001G238200 Sobic002G377700--Sobic001G238200 Sobic006G174300 Sobic006G174300 Sobic002G377700--Sobic006G174300 Sobic001G058300 Sobic001G058300 Sobic002G377700--Sobic001G058300 Sobic010G162800 Sobic010G162800 Sobic002G377700--Sobic010G162800 Sobic003G319400 Sobic003G319400 Sobic002G377700--Sobic003G319400 Sobic009G219200 Sobic009G219200 Sobic002G377700--Sobic009G219200 Sobic004G306900 Sobic004G306900 Sobic002G377700--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic002G377700--Sobic006G079300 Sobic001G238000--Sobic002G377700 Sobic001G238000--Sobic001G238200 Sobic003G140700 Sobic003G140700 Sobic001G238000--Sobic003G140700 Sobic001G237800 Sobic001G237800 Sobic001G238000--Sobic001G237800 Sobic001G238000--Sobic004G306900 Sobic001G238000--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic001G238000--Sobic003G064800 Sobic001G238000--Sobic010G162800 Sobic006G028500 Sobic006G028500 Sobic001G238000--Sobic006G028500 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238200--Sobic001G238000 Sobic010G234500 Sobic010G234500 Sobic001G238200--Sobic010G234500 Sobic006G106900 Sobic006G106900 Sobic001G238200--Sobic006G106900 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic006G277700 Sobic006G277700 Sobic006G174300--Sobic006G277700 Sobic005G202300 Sobic005G202300 Sobic006G174300--Sobic005G202300 Sobic006G174300--Sobic001G058300 Sobic003G053600 Sobic003G053600 Sobic006G174300--Sobic003G053600 Sobic006G174300--Sobic003G319400 Sobic003G353200 Sobic003G353200 Sobic006G174300--Sobic003G353200 Sobic010G031700 Sobic010G031700 Sobic006G174300--Sobic010G031700 Sobic001G379400 Sobic001G379400 Sobic006G174300--Sobic001G379400 Sobic006G174300--Sobic002G377700 Sobic001G058300--Sobic001G238200 Sobic001G438200 Sobic001G438200 Sobic001G058300--Sobic001G438200 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic001G058300--Sobic006G106900 Sobic001G058300--Sobic006G174300 Sobic010G162800--Sobic001G237800 Sobic010G162800--Sobic001G238000 Sobic010G162800--Sobic003G064800 Sobic010G162800--Sobic001G238200 Sobic010G162800--Sobic010G234500 Sobic010G162800--Sobic009G219200 Sobic005G127400 Sobic005G127400 Sobic010G162800--Sobic005G127400 Sobic003G349400 Sobic003G349400 Sobic010G162800--Sobic003G349400 Sobic010G162800--Sobic004G306900 Sobic003G319400--Sobic006G106900 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic007G086300 Sobic007G086300 Sobic003G319400--Sobic007G086300 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic009G219200--Sobic004G306900 Sobic009G219200--Sobic006G079300 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100 Sobic006G079300--Sobic001G438200 Sobic001G242100 Sobic001G242100 Sobic006G079300--Sobic001G242100 Sobic006G079300--Sobic009G219200 Sobic005G160700 Sobic005G160700 Sobic006G079300--Sobic005G160700 Sobic001G229000 Sobic001G229000 Sobic006G079300--Sobic001G229000 Sobic006G079300--Sobic001G379400 Sobic009G065800 Sobic009G065800 Sobic006G079300--Sobic009G065800 Sobic004G322800 Sobic004G322800 Sobic006G079300--Sobic004G322800 Sobic010G148800 Sobic010G148800 Sobic006G079300--Sobic010G148800
Octagon: transcription factors


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