Gene annotation
Transcriptome id Sobic.003G319400.1
Synonym RK3, Sb03g036630, ARK3
Functional annotation receptor protein kinase, putative, expressed
UniProt A0A1B6Q6I4
Pfam PF08276 PF00954 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF63
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os01g57510.1 : receptor protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a048024 , Zm00025a048337 , Zm00025a048282 , Zm00025a027259 , Zm00025a027258 , Zm00025a039879 , Zm00025a048283 , Zm00025a027260
Brachypodium KQK10083 , KQK10097 , KQK10096 , KQK14050
Barley HORVU3Hr1G077110.39 , HORVU3Hr1G077110.1 , HORVU3Hr1G077110.3 , HORVU3Hr1G077110.2 , HORVU3Hr1G077110.5 , HORVU3Hr1G077110.4 , HORVU3Hr1G077110.6 , HORVU3Hr1G077110.9 , HORVU3Hr1G077110.31 , HORVU3Hr1G077110.37 , HORVU3Hr1G077110.36 , HORVU3Hr1G077110.34 , HORVU3Hr1G077110.15 , HORVU3Hr1G077110.14 , HORVU3Hr1G077110.17 , HORVU3Hr1G077110.16 , HORVU3Hr1G077110.11 , HORVU3Hr1G077110.13 , HORVU3Hr1G077110.12 , HORVU3Hr1G077110.19 , HORVU3Hr1G077110.18 , HORVU3Hr1G077170.7 , HORVU3Hr1G077170.6 , HORVU3Hr1G077170.2 , HORVU3Hr1G077170.8 , HORVU2Hr1G121080.18 , HORVU2Hr1G121080.6 , HORVU2Hr1G121080.7 , HORVU2Hr1G121080.4 , HORVU2Hr1G121080.5 , HORVU2Hr1G121080.2 , HORVU2Hr1G121080.3 , HORVU2Hr1G121080.1 , HORVU2Hr1G121080.8 , HORVU2Hr1G121080.9 , HORVU2Hr1G121080.19 , HORVU2Hr1G121080.14 , HORVU2Hr1G121080.15 , HORVU2Hr1G121080.16 , HORVU2Hr1G121080.17 , HORVU2Hr1G121080.10 , HORVU2Hr1G121080.11 , HORVU2Hr1G121080.12 , HORVU2Hr1G121080.13 , HORVU3Hr1G077110.32 , HORVU3Hr1G077110.30 , HORVU3Hr1G077110.38 , HORVU2Hr1G121080.21 , HORVU2Hr1G121080.26 , HORVU3Hr1G077110.35 , HORVU2Hr1G111460.3 , HORVU2Hr1G111460.2 , HORVU2Hr1G111460.1 , HORVU3Hr1G077110.20 , HORVU3Hr1G077110.21 , HORVU3Hr1G077110.22 , HORVU3Hr1G077110.23 , HORVU3Hr1G077110.24 , HORVU3Hr1G077110.25 , HORVU3Hr1G077110.26 , HORVU3Hr1G077110.27 , HORVU3Hr1G077110.28 , HORVU3Hr1G077110.29 , HORVU3Hr1G077110.46 , HORVU3Hr1G077110.47 , HORVU3Hr1G077110.44 , HORVU3Hr1G077110.45 , HORVU3Hr1G077110.42 , HORVU3Hr1G077110.43 , HORVU3Hr1G077110.40 , HORVU3Hr1G077110.41 , HORVU3Hr1G077110.49 , HORVU2Hr1G121080.20 , HORVU2Hr1G121080.23 , HORVU2Hr1G121080.22 , HORVU2Hr1G121080.25 , HORVU2Hr1G121080.24 , HORVU3Hr1G077170.19 , HORVU3Hr1G077170.18 , HORVU3Hr1G077170.17 , HORVU3Hr1G077170.16 , HORVU3Hr1G077170.15 , HORVU3Hr1G077170.14 , HORVU3Hr1G077170.13 , HORVU3Hr1G077170.12 , HORVU3Hr1G077170.10
Wheat TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS3D02G316800 , TraesCS3D02G316800 , TraesCS3B02G352300 , TraesCS2D02G548600 , TraesCS2D02G548600 , TraesCS2D02G548600 , TraesCS2D02G548600 , TraesCS2D02G500900 , TraesCS2D02G548600 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3D02G316900 , TraesCS3A02G323200 , TraesCS2B02G528600 , TraesCS3D02G316700 , TraesCS3D02G316700 , TraesCS2A02G500700 , TraesCS3A02G323200 , TraesCS2A02G211900 , TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS3D02G317000 , TraesCS3A02G323400 , TraesCS3A02G323400 , TraesCS3B02G352500 , TraesCS2A02G547500 , TraesCS2A02G547500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
3 Sobic.004G306900 amino acid transporter, putative, expressed -
4 Sobic.001G438200 expressed protein -
5 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
6 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
7 Sobic.003G282200 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
8 Sobic.003G064800 dirigent, putative, expressed -
9 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.010G031700 thaumatin, putative, expressed -
11 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
12 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
13 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G255000 AIR12, putative, expressed -
15 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
17 Sobic.001G238200 expansin precursor, putative, expressed -
18 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
20 Sobic.009G065800 - -


Gene co-expression network
sample Sobic003G319400 Sobic003G319400 Sobic006G106900 Sobic006G106900 Sobic003G319400--Sobic006G106900 Sobic005G202300 Sobic005G202300 Sobic003G319400--Sobic005G202300 Sobic004G306900 Sobic004G306900 Sobic003G319400--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic007G086300 Sobic007G086300 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G064800 Sobic003G064800 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic006G106900--Sobic003G319400 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic001G414800 Sobic001G414800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic001G507100 Sobic001G507100 Sobic006G106900--Sobic001G507100 Sobic006G106900--Sobic009G181600 Sobic006G106900--Sobic001G438200 Sobic006G106900--Sobic003G280000 Sobic005G202300--Sobic006G106900 Sobic005G202300--Sobic003G319400 Sobic005G202300--Sobic003G280000 Sobic005G202300--Sobic009G181600 Sobic003G053200 Sobic003G053200 Sobic005G202300--Sobic003G053200 Sobic010G031700 Sobic010G031700 Sobic005G202300--Sobic010G031700 Sobic003G353200 Sobic003G353200 Sobic005G202300--Sobic003G353200 Sobic004G029400 Sobic004G029400 Sobic005G202300--Sobic004G029400 Sobic001G058300 Sobic001G058300 Sobic005G202300--Sobic001G058300 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100 Sobic001G438200--Sobic003G064800 Sobic002G255000 Sobic002G255000 Sobic001G438200--Sobic002G255000 Sobic003G140700 Sobic003G140700 Sobic001G438200--Sobic003G140700 Sobic001G438200--Sobic003G319400 Sobic009G219200 Sobic009G219200 Sobic001G438200--Sobic009G219200 Sobic001G438200--Sobic006G106900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic001G438200--Sobic004G322100 Sobic009G181600--Sobic006G106900 Sobic009G181600--Sobic003G319400 Sobic009G181600--Sobic005G202300 Sobic006G092700 Sobic006G092700 Sobic009G181600--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic009G181600--Sobic008G164450 Sobic002G343100 Sobic002G343100 Sobic009G181600--Sobic002G343100 Sobic009G181600--Sobic004G029400 Sobic007G037600 Sobic007G037600 Sobic009G181600--Sobic007G037600 Sobic009G181600--Sobic010G031700 Sobic007G086300--Sobic004G106100 Sobic007G086300--Sobic004G306900 Sobic007G086300--Sobic003G064800 Sobic006G205700 Sobic006G205700 Sobic007G086300--Sobic006G205700 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic007G086300--Sobic003G319400 Sobic009G065800 Sobic009G065800 Sobic003G282200--Sobic009G065800 Sobic003G282200--Sobic003G319400 Sobic003G282200--Sobic001G438200 Sobic003G282200--Sobic001G058300 Sobic003G282200--Sobic006G106900 Sobic003G282200--Sobic007G086300 Sobic003G282200--Sobic005G202300 Sobic003G282200--Sobic002G255000 Sobic003G282200--Sobic004G306900 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic001G238200 Sobic001G238200 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic003G280000--Sobic005G202300 Sobic003G280000--Sobic003G353200 Sobic003G280000--Sobic006G106900 Sobic003G280000--Sobic003G319400 Sobic003G280000--Sobic010G031700 Sobic003G280000--Sobic003G053200 Sobic003G257400 Sobic003G257400 Sobic003G280000--Sobic003G257400 Sobic003G280000--Sobic009G181600 Sobic001G218400 Sobic001G218400 Sobic003G280000--Sobic001G218400
Octagon: transcription factors


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