Gene annotation
Transcriptome id Sobic.001G299100.2,Sobic.001G299100.1
Synonym SRG1, ATSRG1, Sb01g029130
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt C5WSD2
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF158
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G17020 : senescence-related gene 1
RAP-DB (Rice) LOC_Os10g41020.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.003G319400 receptor protein kinase, putative, expressed -
4 Sobic.010G152400 glycosyltransferase, putative, expressed -
5 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
6 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
7 Sobic.008G191400 expressed protein -
8 Sobic.004G306900 amino acid transporter, putative, expressed -
9 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.006G135300 expressed protein -
11 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
12 Sobic.003G240400 leaf senescence related protein, putative, expressed -
13 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
14 Sobic.010G031700 thaumatin, putative, expressed -
15 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
16 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
17 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
18 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
19 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G299100 Sobic001G299100 Sobic004G106100 Sobic004G106100 Sobic001G299100--Sobic004G106100 Sobic006G092700 Sobic006G092700 Sobic001G299100--Sobic006G092700 Sobic003G319400 Sobic003G319400 Sobic001G299100--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic001G299100--Sobic010G152400 Sobic010G082000 Sobic010G082000 Sobic001G299100--Sobic010G082000 Sobic003G000100 Sobic003G000100 Sobic001G299100--Sobic003G000100 Sobic008G191400 Sobic008G191400 Sobic001G299100--Sobic008G191400 Sobic004G306900 Sobic004G306900 Sobic001G299100--Sobic004G306900 Sobic007G086300 Sobic007G086300 Sobic001G299100--Sobic007G086300 Sobic004G106100--Sobic007G086300 Sobic006G205700 Sobic006G205700 Sobic004G106100--Sobic006G205700 Sobic004G106100--Sobic004G306900 Sobic004G106100--Sobic003G000100 Sobic010G031700 Sobic010G031700 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic004G106100--Sobic010G152400 Sobic006G135300 Sobic006G135300 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic010G028100 Sobic010G028100 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic007G073000 Sobic007G073000 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic002G146000 Sobic002G146000 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic006G106900 Sobic006G106900 Sobic003G319400--Sobic006G106900 Sobic005G202300 Sobic005G202300 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G064800 Sobic003G064800 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic010G152400--Sobic003G000100 Sobic004G322100 Sobic004G322100 Sobic010G152400--Sobic004G322100 Sobic003G240400 Sobic003G240400 Sobic010G152400--Sobic003G240400 Sobic010G152400--Sobic004G306900 Sobic010G152400--Sobic006G092700 Sobic010G152400--Sobic010G082000 Sobic006G003100 Sobic006G003100 Sobic010G152400--Sobic006G003100 Sobic010G152400--Sobic004G106100 Sobic010G152400--Sobic006G019700 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic003G215300 Sobic003G215300 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic003G000100--Sobic007G086300 Sobic008G191400--Sobic001G299100 Sobic008G191400--Sobic006G092700 Sobic008G191400--Sobic003G319400 Sobic008G191400--Sobic006G135300 Sobic007G100700 Sobic007G100700 Sobic008G191400--Sobic007G100700 Sobic003G426500 Sobic003G426500 Sobic008G191400--Sobic003G426500 Sobic008G191400--Sobic004G306900 Sobic008G191400--Sobic009G181600 Sobic008G191400--Sobic010G082000 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic004G306900--Sobic003G000100 Sobic004G306900--Sobic004G106100 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic007G086300--Sobic004G106100 Sobic007G086300--Sobic004G306900 Sobic007G086300--Sobic003G064800 Sobic007G086300--Sobic006G205700 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic007G086300--Sobic003G319400
Octagon: transcription factors


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