Gene annotation
Transcriptome id Sobic.006G205700.1
Synonym XTH16, Sb06g027680
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5YFH6
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G23730 : xyloglucan endotransglucosylase/hydrolase 16
RAP-DB (Rice) LOC_Os04g51510.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a056957 , Zm00025a009904
Brachypodium KQJ84412
Barley HORVU2Hr1G101160.3 , HORVU2Hr1G101160.2 , HORVU2Hr1G101160.1 , HORVU2Hr1G101160.7 , HORVU2Hr1G101160.6 , HORVU2Hr1G101160.5 , HORVU2Hr1G101160.4
Wheat TraesCS2A02G433700 , TraesCS2D02G431600 , TraesCS2A02G433600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
3 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
6 Sobic.005G046400 - -
7 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
8 Sobic.003G441601 - -
9 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
10 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
11 Sobic.010G191600 cytochrome P450, putative, expressed -
12 Sobic.010G191700 cytochrome P450, putative, expressed -
13 Sobic.002G111900 receptor-like kinase, putative, expressed -
14 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
17 Sobic.005G097400 cell death associated protein, putative, expressed -
18 Sobic.005G217766 - -
19 Sobic.010G031700 thaumatin, putative, expressed -
20 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic006G205700 Sobic006G205700 Sobic002G391400 Sobic002G391400 Sobic006G205700--Sobic002G391400 Sobic003G441800 Sobic003G441800 Sobic006G205700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic003G441601 Sobic003G441601 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic002G391400--Sobic007G206800 Sobic002G391400--Sobic010G241900 Sobic002G391400--Sobic006G205700 Sobic010G191700 Sobic010G191700 Sobic002G391400--Sobic010G191700 Sobic007G220400 Sobic007G220400 Sobic002G391400--Sobic007G220400 Sobic002G334000 Sobic002G334000 Sobic002G391400--Sobic002G334000 Sobic002G392100 Sobic002G392100 Sobic002G391400--Sobic002G392100 Sobic002G111900 Sobic002G111900 Sobic002G391400--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic002G391400--Sobic010G191600 Sobic003G053200 Sobic003G053200 Sobic003G441800--Sobic003G053200 Sobic003G441700 Sobic003G441700 Sobic003G441800--Sobic003G441700 Sobic003G441800--Sobic003G441601 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic004G121600 Sobic004G121600 Sobic003G441800--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic003G441800--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic007G086300 Sobic007G086300 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G306900 Sobic004G306900 Sobic004G106100--Sobic004G306900 Sobic003G000100 Sobic003G000100 Sobic004G106100--Sobic003G000100 Sobic010G031700 Sobic010G031700 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic010G152400 Sobic010G152400 Sobic004G106100--Sobic010G152400 Sobic001G499900 Sobic001G499900 Sobic003G167300--Sobic001G499900 Sobic003G167300--Sobic006G205700 Sobic008G022100 Sobic008G022100 Sobic003G167300--Sobic008G022100 Sobic003G167300--Sobic009G065700 Sobic003G167300--Sobic003G441800 Sobic003G167300--Sobic002G391400 Sobic003G167300--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic003G167300--Sobic001G348400 Sobic003G167300--Sobic003G095100 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic002G391300 Sobic002G391300 Sobic010G241900--Sobic002G391300 Sobic010G128300 Sobic010G128300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic005G134200 Sobic005G134200 Sobic010G241900--Sobic005G134200 Sobic005G226350 Sobic005G226350 Sobic010G241900--Sobic005G226350 Sobic005G046400--Sobic003G441601 Sobic005G046400--Sobic003G441800 Sobic005G046400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G046400--Sobic006G171100 Sobic005G046400--Sobic002G111900 Sobic005G046400--Sobic010G191700 Sobic005G046400--Sobic006G205700 Sobic005G046400--Sobic010G241900 Sobic009G136800 Sobic009G136800 Sobic005G046400--Sobic009G136800 Sobic007G206800--Sobic002G391400 Sobic007G206800--Sobic002G334000 Sobic007G206800--Sobic007G220400 Sobic007G206800--Sobic010G241900 Sobic007G206800--Sobic010G191700 Sobic007G206800--Sobic006G205700 Sobic005G080600 Sobic005G080600 Sobic007G206800--Sobic005G080600 Sobic007G206800--Sobic002G111900 Sobic007G206800--Sobic002G392100 Sobic003G441601--Sobic002G391300 Sobic003G441601--Sobic005G046400 Sobic003G441601--Sobic002G111900 Sobic003G441601--Sobic006G171100 Sobic010G010000 Sobic010G010000 Sobic003G441601--Sobic010G010000 Sobic003G441601--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic003G441601--Sobic002G289500 Sobic003G441601--Sobic010G191700 Sobic004G014600 Sobic004G014600 Sobic003G441601--Sobic004G014600 Sobic003G095100--Sobic006G205700 Sobic003G095100--Sobic003G441800 Sobic008G020000 Sobic008G020000 Sobic003G095100--Sobic008G020000 Sobic003G095100--Sobic003G167300 Sobic003G095100--Sobic003G282300 Sobic003G095100--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic003G095100--Sobic007G090600 Sobic003G095100--Sobic004G106100 Sobic003G095100--Sobic005G046400
Octagon: transcription factors


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