Gene annotation
Transcriptome id Sobic.002G111900.1
Synonym RK3, Sb02g009580, ARK3
Functional annotation receptor-like kinase, putative, expressed
UniProt C5X494
Pfam PF08276 PF01453 PF00954 PF07714
Panther DB PTHR27002 PTHR27002:SF84
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os07g36544.2 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021759 , Zm00025a014511 , Zm00025a051601 , Zm00025a027259
Brachypodium KQJ84853 , KQJ84852 , KQJ84854
Barley HORVU5Hr1G087240.1 , HORVU5Hr1G087240.2 , HORVU7Hr1G046620.12 , HORVU7Hr1G046620.10 , HORVU4Hr1G004890.4 , HORVU4Hr1G004890.1 , HORVU4Hr1G004890.3 , HORVU4Hr1G004890.2 , HORVU4Hr1G028410.1 , HORVU2Hr1G116880.30 , HORVU2Hr1G116880.13 , HORVU2Hr1G116880.10 , HORVU2Hr1G116880.11 , HORVU2Hr1G008220.1 , HORVU2Hr1G008220.3 , HORVU2Hr1G008220.2 , HORVU2Hr1G008130.12 , HORVU2Hr1G008130.10 , HORVU2Hr1G008140.1 , HORVU2Hr1G008140.3 , HORVU2Hr1G008140.2 , HORVU2Hr1G008140.5 , HORVU2Hr1G008140.4 , HORVU2Hr1G008140.7 , HORVU2Hr1G008140.6 , HORVU0Hr1G014650.2 , HORVU0Hr1G014650.3 , HORVU0Hr1G014650.1 , HORVU2Hr1G116880.1 , HORVU2Hr1G116880.2 , HORVU2Hr1G116880.3 , HORVU2Hr1G116880.4 , HORVU2Hr1G116880.5 , HORVU2Hr1G116880.6 , HORVU5Hr1G124170.2 , HORVU5Hr1G124170.3 , HORVU5Hr1G124170.1 , HORVU2Hr1G008130.8 , HORVU2Hr1G008130.2 , HORVU2Hr1G008130.3 , HORVU2Hr1G008130.4 , HORVU2Hr1G008130.6 , HORVU2Hr1G008130.7 , HORVU4Hr1G028400.1 , HORVU2Hr1G116880.21 , HORVU2Hr1G116880.20 , HORVU2Hr1G116880.27 , HORVU2Hr1G116880.29 , HORVU2Hr1G116880.28 , HORVU2Hr1G116880.9 , HORVU2Hr1G008130.9 , HORVU2Hr1G008130.1 , HORVU7Hr1G046620.9 , HORVU7Hr1G046620.8
Wheat TraesCS4B02G031100 , TraesCS2A02G051200 , TraesCS5B02G353400 , TraesCS1D02G239700 , TraesCS4A02G282000 , TraesCS4A02G282300 , TraesCS1B02G251700 , TraesCS5B02G353300 , TraesCS6B02G303800 , TraesCS1A02G239500 , TraesCS6A02G276300 , TraesCS6A02G276300 , TraesCS6A02G276300 , TraesCS5D02G357800 , TraesCS6D02G256700 , TraesCS6D02G256700 , TraesCS2D02G050700 , TraesCS5A02G350800 , TraesCS4D02G028700 , TraesCS4D02G028600 , TraesCS4D02G028600 , TraesCS5A02G350700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G191700 cytochrome P450, putative, expressed -
2 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G441601 - -
4 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
5 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
6 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
7 Sobic.006G171100 expansin precursor, putative, expressed -
8 Sobic.005G046400 - -
9 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
11 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G191600 cytochrome P450, putative, expressed -
13 Sobic.005G226350 - -
14 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
17 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
20 Sobic.009G065700 - -


Gene co-expression network
sample Sobic002G111900 Sobic002G111900 Sobic010G191700 Sobic010G191700 Sobic002G111900--Sobic010G191700 Sobic002G391300 Sobic002G391300 Sobic002G111900--Sobic002G391300 Sobic003G441601 Sobic003G441601 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic010G241900 Sobic010G241900 Sobic002G111900--Sobic010G241900 Sobic010G010000 Sobic010G010000 Sobic002G111900--Sobic010G010000 Sobic006G171100 Sobic006G171100 Sobic002G111900--Sobic006G171100 Sobic005G046400 Sobic005G046400 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic010G191700--Sobic010G241900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G128300 Sobic010G128300 Sobic010G191700--Sobic010G128300 Sobic002G391400 Sobic002G391400 Sobic010G191700--Sobic002G391400 Sobic010G191700--Sobic003G441601 Sobic007G206800 Sobic007G206800 Sobic010G191700--Sobic007G206800 Sobic005G134200 Sobic005G134200 Sobic010G191700--Sobic005G134200 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic002G391300--Sobic010G128300 Sobic002G391300--Sobic005G134200 Sobic002G289500 Sobic002G289500 Sobic002G391300--Sobic002G289500 Sobic009G136800 Sobic009G136800 Sobic002G391300--Sobic009G136800 Sobic003G441601--Sobic002G391300 Sobic003G441601--Sobic005G046400 Sobic003G441601--Sobic002G111900 Sobic003G441601--Sobic006G171100 Sobic003G441601--Sobic010G010000 Sobic003G441800 Sobic003G441800 Sobic003G441601--Sobic003G441800 Sobic003G441601--Sobic002G289500 Sobic003G441601--Sobic010G191700 Sobic004G014600 Sobic004G014600 Sobic003G441601--Sobic004G014600 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G220400--Sobic007G206800 Sobic007G220400--Sobic002G111900 Sobic005G226350 Sobic005G226350 Sobic007G220400--Sobic005G226350 Sobic007G220400--Sobic002G391400 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic002G334000 Sobic002G334000 Sobic007G220400--Sobic002G334000 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic010G241900--Sobic005G134200 Sobic010G241900--Sobic005G226350 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic006G171100--Sobic010G010000 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic006G171100--Sobic005G226400 Sobic006G047200 Sobic006G047200 Sobic006G171100--Sobic006G047200 Sobic005G046400--Sobic003G441601 Sobic005G046400--Sobic003G441800 Sobic005G046400--Sobic002G391300 Sobic005G046400--Sobic006G171100 Sobic005G046400--Sobic002G111900 Sobic005G046400--Sobic010G191700 Sobic006G205700 Sobic006G205700 Sobic005G046400--Sobic006G205700 Sobic005G046400--Sobic010G241900 Sobic005G046400--Sobic009G136800 Sobic006G059800--Sobic002G111900 Sobic006G059800--Sobic006G047200 Sobic005G035900 Sobic005G035900 Sobic006G059800--Sobic005G035900 Sobic006G059800--Sobic002G391300 Sobic002G392000 Sobic002G392000 Sobic006G059800--Sobic002G392000 Sobic006G059800--Sobic010G010000 Sobic006G059800--Sobic010G191700 Sobic006G059800--Sobic006G171100 Sobic006G059800--Sobic010G241900
Octagon: transcription factors


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