Gene annotation
| Transcriptome id | Sobic.002G289500.1 |
|---|---|
| Synonym | Sb02g032130 |
| Functional annotation | carbohydrate binding protein, putative, expressed |
| UniProt | A0A1B6QE05 |
| Pfam | PF00954 PF08276 PF01453 PF07714 |
| Panther DB | PTHR27002 PTHR27002:SF131 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT1G61610 : S-locus lectin protein kinase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os09g37840.1 : carbohydrate binding protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a051601 |
| Brachypodium | KQJ88086 , KQJ91373 , PNT65088 |
| Barley | HORVU2Hr1G044600.6 , HORVU2Hr1G044600.7 , HORVU2Hr1G044600.4 , HORVU2Hr1G044600.2 , HORVU2Hr1G044600.3 , HORVU2Hr1G044600.1 , HORVU2Hr1G044600.8 , HORVU2Hr1G044600.15 , HORVU2Hr1G044600.10 , HORVU2Hr1G044600.11 , HORVU2Hr1G044600.12 , HORVU2Hr1G044600.13 , HORVU5Hr1G087040.2 , HORVU5Hr1G087040.3 , HORVU5Hr1G087040.1 , HORVU5Hr1G087040.6 , HORVU5Hr1G087040.7 , HORVU5Hr1G087040.4 , HORVU5Hr1G087040.5 , HORVU5Hr1G087040.8 |
| Wheat | TraesCS3B02G022400 , TraesCS5D02G358600 , TraesCSU02G072500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G391300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 2 | Sobic.001G415100 | terpene synthase, putative, expressed | - |
| 3 | Sobic.003G441601 | - | - |
| 4 | Sobic.006G171100 | expansin precursor, putative, expressed | - |
| 5 | Sobic.001G153100 | sulfate transporter, putative, expressed | K17470: sulfate transporter 1, high-affinity |
| 6 | Sobic.009G136800 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 7 | Sobic.002G029500 | cytochrome P450 84A1, putative, expressed | K09755: CYP84A, ferulate-5-hydroxylase |
| 8 | Sobic.006G230100 | TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 9 | Sobic.002G063700 | NB-ARC domain containing protein, expressed | - |
| 10 | Sobic.002G111900 | receptor-like kinase, putative, expressed | - |
| 11 | Sobic.010G010000 | plant protein of unknown function domain containing protein, expressed | - |
| 12 | Sobic.005G134200 | "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed | K14487: auxin responsive GH3 gene family |
| 13 | Sobic.007G015000 | methyltransferase domain containing protein, expressed | - |
| 14 | Sobic.005G046400 | - | - |
| 15 | Sobic.006G047200 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 16 | Sobic.009G065700 | - | - |
| 17 | Sobic.010G241900 | Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed | - |
| 18 | Sobic.004G299500 | - | - |
| 19 | Sobic.005G182900 | NBS-LRR disease resistance protein, putative, expressed | - |
| 20 | Sobic.008G109400 | oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
