Gene annotation
Transcriptome id Sobic.006G171100.1
Synonym Sb06g024640, EXPB2, ATHEXPBETA1.4, ATEXPB2
Functional annotation expansin precursor, putative, expressed
UniProt C5YDH9
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os04g46650.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056861
Brachypodium KQJ83951 , KQJ83950 , KQJ83952
Barley HORVU6Hr1G063180.1 , HORVU3Hr1G073120.1 , HORVU3Hr1G105180.1 , HORVU2Hr1G097490.7 , HORVU2Hr1G097490.6 , HORVU2Hr1G097490.5 , HORVU2Hr1G097490.4 , HORVU2Hr1G097490.3 , HORVU2Hr1G097490.2 , HORVU2Hr1G097490.1 , HORVU0Hr1G016410.1
Wheat TraesCS2A02G413500 , TraesCS6A02G249200 , TraesCS2D02G411100 , TraesCS6D02G231200 , TraesCS2B02G432300 , TraesCS6B02G275800 , TraesCS3B02G526800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
4 Sobic.003G441601 - -
5 Sobic.002G111900 receptor-like kinase, putative, expressed -
6 Sobic.005G046400 - -
7 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
8 Sobic.005G226400 RGH1A, putative, expressed -
9 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
12 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
13 Sobic.002G063700 NB-ARC domain containing protein, expressed -
14 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
16 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
17 Sobic.001G415100 terpene synthase, putative, expressed -
18 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic006G171100 Sobic006G171100 Sobic009G136800 Sobic009G136800 Sobic006G171100--Sobic009G136800 Sobic002G391300 Sobic002G391300 Sobic006G171100--Sobic002G391300 Sobic010G010000 Sobic010G010000 Sobic006G171100--Sobic010G010000 Sobic003G441601 Sobic003G441601 Sobic006G171100--Sobic003G441601 Sobic002G111900 Sobic002G111900 Sobic006G171100--Sobic002G111900 Sobic005G046400 Sobic005G046400 Sobic006G171100--Sobic005G046400 Sobic002G289500 Sobic002G289500 Sobic006G171100--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic006G171100--Sobic005G226400 Sobic006G047200 Sobic006G047200 Sobic006G171100--Sobic006G047200 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic010G128300 Sobic010G128300 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic002G392000 Sobic002G392000 Sobic009G136800--Sobic002G392000 Sobic009G136800--Sobic002G289500 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic010G191700 Sobic010G191700 Sobic002G391300--Sobic010G191700 Sobic010G241900 Sobic010G241900 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic002G391300--Sobic010G128300 Sobic005G134200 Sobic005G134200 Sobic002G391300--Sobic005G134200 Sobic002G391300--Sobic002G289500 Sobic002G391300--Sobic009G136800 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic010G010000--Sobic005G226400 Sobic010G010000--Sobic002G063700 Sobic003G441601--Sobic002G391300 Sobic003G441601--Sobic005G046400 Sobic003G441601--Sobic002G111900 Sobic003G441601--Sobic006G171100 Sobic003G441601--Sobic010G010000 Sobic003G441800 Sobic003G441800 Sobic003G441601--Sobic003G441800 Sobic003G441601--Sobic002G289500 Sobic003G441601--Sobic010G191700 Sobic004G014600 Sobic004G014600 Sobic003G441601--Sobic004G014600 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic005G046400--Sobic003G441601 Sobic005G046400--Sobic003G441800 Sobic005G046400--Sobic002G391300 Sobic005G046400--Sobic006G171100 Sobic005G046400--Sobic002G111900 Sobic005G046400--Sobic010G191700 Sobic006G205700 Sobic006G205700 Sobic005G046400--Sobic006G205700 Sobic005G046400--Sobic010G241900 Sobic005G046400--Sobic009G136800 Sobic002G289500--Sobic002G391300 Sobic001G415100 Sobic001G415100 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic002G289500--Sobic001G153100 Sobic002G289500--Sobic009G136800 Sobic002G029500 Sobic002G029500 Sobic002G289500--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic002G289500--Sobic006G230100 Sobic002G289500--Sobic002G063700 Sobic005G226400--Sobic005G134200 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic005G226400--Sobic002G391300 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226350 Sobic005G226350 Sobic005G226400--Sobic005G226350 Sobic005G226400--Sobic010G010000 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic005G205400 Sobic005G205400 Sobic006G047200--Sobic005G205400 Sobic008G084800 Sobic008G084800 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200
Octagon: transcription factors


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