Gene annotation
Transcriptome id Sobic.005G226400.1
Synonym Sb05g027470
Functional annotation RGH1A, putative, expressed
UniProt C5Y8I1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF541
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53350 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os08g07330.2 : RGH1A, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT62320 , PNT62322 , PNT62321 , PNT62319 , KQJ85785
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
2 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
3 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.006G171100 expansin precursor, putative, expressed -
6 Sobic.005G223700 RGH1A, putative, expressed -
7 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.005G226350 - -
9 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
10 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
11 Sobic.002G111900 receptor-like kinase, putative, expressed -
12 Sobic.005G205400 - -
13 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G063700 NB-ARC domain containing protein, expressed -
15 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
16 Sobic.010G191700 cytochrome P450, putative, expressed -
17 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
18 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
19 Sobic.010G213600 histidine kinase, putative, expressed -
20 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic005G226400 Sobic005G226400 Sobic005G134200 Sobic005G134200 Sobic005G226400--Sobic005G134200 Sobic009G136800 Sobic009G136800 Sobic005G226400--Sobic009G136800 Sobic010G128300 Sobic010G128300 Sobic005G226400--Sobic010G128300 Sobic002G391300 Sobic002G391300 Sobic005G226400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic006G047200 Sobic006G047200 Sobic005G226400--Sobic006G047200 Sobic005G226350 Sobic005G226350 Sobic005G226400--Sobic005G226350 Sobic010G010000 Sobic010G010000 Sobic005G226400--Sobic010G010000 Sobic010G269000 Sobic010G269000 Sobic005G134200--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic005G134200--Sobic002G391300 Sobic010G191700 Sobic010G191700 Sobic005G134200--Sobic010G191700 Sobic010G241900 Sobic010G241900 Sobic005G134200--Sobic010G241900 Sobic005G134200--Sobic010G128300 Sobic007G220400 Sobic007G220400 Sobic005G134200--Sobic007G220400 Sobic005G134200--Sobic006G047200 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic002G392000 Sobic002G392000 Sobic009G136800--Sobic002G392000 Sobic002G289500 Sobic002G289500 Sobic009G136800--Sobic002G289500 Sobic010G128300--Sobic002G392000 Sobic010G128300--Sobic010G241900 Sobic010G128300--Sobic010G191700 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic010G128300--Sobic005G226350 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic010G128300--Sobic007G220400 Sobic003G441601 Sobic003G441601 Sobic002G391300--Sobic003G441601 Sobic002G111900 Sobic002G111900 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic002G391300--Sobic010G128300 Sobic002G391300--Sobic005G134200 Sobic002G391300--Sobic002G289500 Sobic002G391300--Sobic009G136800 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic006G171100--Sobic010G010000 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic005G046400 Sobic005G046400 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic006G171100--Sobic005G226400 Sobic006G171100--Sobic006G047200 Sobic005G223700--Sobic005G226400 Sobic005G223700--Sobic006G171100 Sobic005G223700--Sobic002G111900 Sobic005G223700--Sobic007G220400 Sobic005G223700--Sobic006G047200 Sobic005G223700--Sobic009G136800 Sobic005G223700--Sobic010G010000 Sobic005G223700--Sobic005G134200 Sobic010G213600 Sobic010G213600 Sobic005G223700--Sobic010G213600 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic005G205400 Sobic005G205400 Sobic006G047200--Sobic005G205400 Sobic008G084800 Sobic008G084800 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200 Sobic005G226350--Sobic007G220400 Sobic005G226350--Sobic010G128300 Sobic005G226350--Sobic010G241900 Sobic005G226350--Sobic010G269000 Sobic005G226350--Sobic010G191700 Sobic005G226350--Sobic005G134200 Sobic005G226350--Sobic002G111900 Sobic005G226350--Sobic005G226400 Sobic005G226350--Sobic004G008600 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic010G010000--Sobic005G226400 Sobic010G010000--Sobic002G063700
Octagon: transcription factors


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