Gene annotation
Transcriptome id Sobic.006G047200.1
Synonym FRU, FIT1, BHLH029, ATFIT1, Sb06g012030, ATBHLH029, ATBHLH29
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1B6PK80
Pfam PF00010
Panther DB PTHR31945 PTHR31945:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28160 : FER-like regulator of iron uptake
RAP-DB (Rice) LOC_Os04g31290.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011805 , Zm00025a055097 , Zm00025a055870
Brachypodium KQJ82241
Barley HORVU2Hr1G068960.4 , HORVU2Hr1G068960.1 , HORVU2Hr1G068960.3 , HORVU2Hr1G068960.2
Wheat TraesCS2D02G280100 , TraesCS2A02G281200 , TraesCS2B02G298600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
2 Sobic.005G205400 - -
3 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
4 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G234100 expressed protein -
6 Sobic.005G101000 - -
7 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
9 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
10 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.006G171100 expansin precursor, putative, expressed -
12 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
13 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.005G226400 RGH1A, putative, expressed -
15 Sobic.002G111900 receptor-like kinase, putative, expressed -
16 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
18 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
19 Sobic.010G191700 cytochrome P450, putative, expressed -
20 Sobic.008G058600 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G047200 Sobic006G047200 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic005G205400 Sobic005G205400 Sobic006G047200--Sobic005G205400 Sobic008G084800 Sobic008G084800 Sobic006G047200--Sobic008G084800 Sobic002G392000 Sobic002G392000 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic009G136800 Sobic009G136800 Sobic006G047200--Sobic009G136800 Sobic010G241900 Sobic010G241900 Sobic006G047200--Sobic010G241900 Sobic005G134200 Sobic005G134200 Sobic006G047200--Sobic005G134200 Sobic005G035900--Sobic006G047200 Sobic005G035900--Sobic010G241900 Sobic002G111900 Sobic002G111900 Sobic005G035900--Sobic002G111900 Sobic007G220400 Sobic007G220400 Sobic005G035900--Sobic007G220400 Sobic006G059800 Sobic006G059800 Sobic005G035900--Sobic006G059800 Sobic005G035900--Sobic002G392000 Sobic005G035900--Sobic005G134200 Sobic006G171100 Sobic006G171100 Sobic005G035900--Sobic006G171100 Sobic002G391300 Sobic002G391300 Sobic005G035900--Sobic002G391300 Sobic005G205400--Sobic008G084800 Sobic005G205400--Sobic001G234100 Sobic005G205400--Sobic006G047200 Sobic005G205400--Sobic002G392000 Sobic005G212800 Sobic005G212800 Sobic005G205400--Sobic005G212800 Sobic005G205400--Sobic005G101000 Sobic010G128300 Sobic010G128300 Sobic005G205400--Sobic010G128300 Sobic001G153100 Sobic001G153100 Sobic005G205400--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic005G205400--Sobic008G058600 Sobic008G084800--Sobic001G234100 Sobic008G084800--Sobic005G205400 Sobic008G084800--Sobic005G212800 Sobic008G084800--Sobic005G101000 Sobic008G084800--Sobic006G047200 Sobic008G084800--Sobic002G392000 Sobic005G176600 Sobic005G176600 Sobic008G084800--Sobic005G176600 Sobic008G084800--Sobic008G058600 Sobic007G097550 Sobic007G097550 Sobic008G084800--Sobic007G097550 Sobic002G392000--Sobic010G128300 Sobic002G392000--Sobic005G205400 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic002G392000--Sobic009G136800 Sobic002G392000--Sobic008G084800 Sobic010G191700 Sobic010G191700 Sobic002G392000--Sobic010G191700 Sobic002G392000--Sobic010G241900 Sobic002G392000--Sobic002G391300 Sobic001G234100--Sobic008G084800 Sobic001G234100--Sobic005G101000 Sobic001G234100--Sobic005G212800 Sobic001G234100--Sobic005G205400 Sobic001G234100--Sobic006G047200 Sobic001G234100--Sobic008G058600 Sobic001G395900 Sobic001G395900 Sobic001G234100--Sobic001G395900 Sobic001G234100--Sobic005G176600 Sobic003G045650 Sobic003G045650 Sobic001G234100--Sobic003G045650 Sobic005G101000--Sobic001G234100 Sobic005G101000--Sobic001G395900 Sobic005G101000--Sobic008G058600 Sobic005G101000--Sobic008G084800 Sobic005G101000--Sobic006G047200 Sobic005G101000--Sobic005G212800 Sobic005G101000--Sobic005G205400 Sobic004G299500 Sobic004G299500 Sobic005G101000--Sobic004G299500 Sobic007G202480 Sobic007G202480 Sobic005G101000--Sobic007G202480 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic005G226400 Sobic005G226400 Sobic009G136800--Sobic005G226400 Sobic010G010000 Sobic010G010000 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic009G136800--Sobic002G392000 Sobic002G289500 Sobic002G289500 Sobic009G136800--Sobic002G289500 Sobic010G241900--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic007G206800 Sobic007G206800 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic010G241900--Sobic005G134200 Sobic005G226350 Sobic005G226350 Sobic010G241900--Sobic005G226350 Sobic010G269000 Sobic010G269000 Sobic005G134200--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic005G134200--Sobic006G047200
Octagon: transcription factors


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