Gene annotation
Transcriptome id Sobic.008G058600.2
Synonym Sb08g004940
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1Z5R5V0
Pfam PF00582 PF00069
Panther DB PTHR27001 PTHR27001:SF23
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G77280 : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
RAP-DB (Rice) LOC_Os12g07990.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a054075 , Zm00025a034064
Brachypodium PNT65352
Barley HORVU5Hr1G037570.4 , HORVU5Hr1G037570.1 , HORVU5Hr1G037570.3 , HORVU5Hr1G037570.2 , HORVU0Hr1G029980.2 , HORVU0Hr1G029980.1
Wheat TraesCS5D02G125300 , TraesCS5B02G115700 , TraesCS5B02G115700 , TraesCS5D02G125300 , TraesCS5A02G114900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G101000 - -
2 Sobic.003G045650 - -
3 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
4 Sobic.004G299500 - -
5 Sobic.001G234100 expressed protein -
6 Sobic.005G176600 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
7 Sobic.007G202480 - -
8 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.006G229901 - -
10 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
11 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
12 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
13 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
14 Sobic.005G069166 - -
15 Sobic.005G205400 - -
16 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.007G015000 methyltransferase domain containing protein, expressed -
18 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
19 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.009G106500 PMR5, putative, expressed -


Gene co-expression network
sample Sobic008G058600 Sobic008G058600 Sobic005G101000 Sobic005G101000 Sobic008G058600--Sobic005G101000 Sobic003G045650 Sobic003G045650 Sobic008G058600--Sobic003G045650 Sobic001G395900 Sobic001G395900 Sobic008G058600--Sobic001G395900 Sobic004G299500 Sobic004G299500 Sobic008G058600--Sobic004G299500 Sobic001G234100 Sobic001G234100 Sobic008G058600--Sobic001G234100 Sobic005G176600 Sobic005G176600 Sobic008G058600--Sobic005G176600 Sobic007G202480 Sobic007G202480 Sobic008G058600--Sobic007G202480 Sobic006G230100 Sobic006G230100 Sobic008G058600--Sobic006G230100 Sobic006G229901 Sobic006G229901 Sobic008G058600--Sobic006G229901 Sobic005G101000--Sobic001G234100 Sobic005G101000--Sobic001G395900 Sobic005G101000--Sobic008G058600 Sobic008G084800 Sobic008G084800 Sobic005G101000--Sobic008G084800 Sobic006G047200 Sobic006G047200 Sobic005G101000--Sobic006G047200 Sobic005G212800 Sobic005G212800 Sobic005G101000--Sobic005G212800 Sobic005G205400 Sobic005G205400 Sobic005G101000--Sobic005G205400 Sobic005G101000--Sobic004G299500 Sobic005G101000--Sobic007G202480 Sobic003G045650--Sobic006G229901 Sobic003G045650--Sobic008G058600 Sobic003G045650--Sobic005G101000 Sobic003G045650--Sobic007G202480 Sobic003G045650--Sobic004G299500 Sobic003G045650--Sobic001G395900 Sobic003G045650--Sobic005G176600 Sobic003G045650--Sobic005G212800 Sobic003G045650--Sobic001G234100 Sobic001G395900--Sobic007G202480 Sobic001G395900--Sobic004G299500 Sobic001G395900--Sobic005G101000 Sobic001G395900--Sobic006G230100 Sobic006G230200 Sobic006G230200 Sobic001G395900--Sobic006G230200 Sobic001G395900--Sobic008G058600 Sobic001G395900--Sobic006G229901 Sobic004G261500 Sobic004G261500 Sobic001G395900--Sobic004G261500 Sobic005G069166 Sobic005G069166 Sobic001G395900--Sobic005G069166 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic007G015000 Sobic007G015000 Sobic004G299500--Sobic007G015000 Sobic005G069332 Sobic005G069332 Sobic004G299500--Sobic005G069332 Sobic001G153100 Sobic001G153100 Sobic004G299500--Sobic001G153100 Sobic004G299500--Sobic008G058600 Sobic001G234100--Sobic008G084800 Sobic001G234100--Sobic005G101000 Sobic001G234100--Sobic005G212800 Sobic001G234100--Sobic005G205400 Sobic001G234100--Sobic006G047200 Sobic001G234100--Sobic008G058600 Sobic001G234100--Sobic001G395900 Sobic001G234100--Sobic005G176600 Sobic001G234100--Sobic003G045650 Sobic005G176600--Sobic008G058600 Sobic005G176600--Sobic005G101000 Sobic005G176600--Sobic003G045650 Sobic005G176600--Sobic001G234100 Sobic005G176600--Sobic008G084800 Sobic005G176600--Sobic001G395900 Sobic005G176600--Sobic005G212800 Sobic005G176600--Sobic005G205400 Sobic005G176600--Sobic006G229901 Sobic007G202480--Sobic001G395900 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic007G202480--Sobic001G153100 Sobic007G202480--Sobic006G230200 Sobic007G202480--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic007G202480--Sobic008G105800 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic006G229901--Sobic003G045650 Sobic006G229901--Sobic001G395900 Sobic006G229901--Sobic006G230100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332
Octagon: transcription factors


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