Gene annotation
Transcriptome id Sobic.004G261500.1
Synonym Sb04g029970
Functional annotation phosphoribosyl transferase, putative, expressed
UniProt C5XZW8
Pfam PF13793 PF00156
Panther DB PTHR10210 PTHR10210:SF34
NCBI CDD KOG1448; Ribose-phosphate pyrophosphokinase
KEGG Orthology -
Gene Ontology GO:0009116; nucleoside metabolic process


Orthologs (automatic annotation)
TAIR AT2G42910 : Phosphoribosyltransferase family protein
RAP-DB (Rice) LOC_Os02g48390.1 : phosphoribosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a032521 , Zm00025a021806
Brachypodium KQK01012
Barley HORVU6Hr1G070330.5 , HORVU6Hr1G070330.4 , HORVU6Hr1G070330.7 , HORVU6Hr1G070330.6 , HORVU6Hr1G070330.1 , HORVU6Hr1G070330.3 , HORVU6Hr1G070330.2
Wheat TraesCS6B02G308200 , TraesCS6A02G279400 , TraesCS6A02G279400 , TraesCS6D02G259800
Populus -


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cDNA sequences
Sobic.004G261500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
2 Sobic.005G101000 - -
3 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.004G299500 - -
5 Sobic.008G058600 protein kinase family protein, putative, expressed -
6 Sobic.007G202480 - -
7 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
9 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.006G229901 - -
12 Sobic.001G234100 expressed protein -
13 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
15 Sobic.007G015000 methyltransferase domain containing protein, expressed -
16 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.005G205400 - -
18 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
19 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
20 Sobic.005G069166 - -


Gene co-expression network
sample Sobic004G261500 Sobic004G261500 Sobic001G395900 Sobic001G395900 Sobic004G261500--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic004G261500--Sobic005G101000 Sobic006G230100 Sobic006G230100 Sobic004G261500--Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic004G261500--Sobic004G299500 Sobic008G058600 Sobic008G058600 Sobic004G261500--Sobic008G058600 Sobic007G202480 Sobic007G202480 Sobic004G261500--Sobic007G202480 Sobic006G230200 Sobic006G230200 Sobic004G261500--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic004G261500--Sobic001G153100 Sobic003G154500 Sobic003G154500 Sobic004G261500--Sobic003G154500 Sobic001G395900--Sobic007G202480 Sobic001G395900--Sobic004G299500 Sobic001G395900--Sobic005G101000 Sobic001G395900--Sobic006G230100 Sobic001G395900--Sobic006G230200 Sobic001G395900--Sobic008G058600 Sobic006G229901 Sobic006G229901 Sobic001G395900--Sobic006G229901 Sobic001G395900--Sobic004G261500 Sobic005G069166 Sobic005G069166 Sobic001G395900--Sobic005G069166 Sobic001G234100 Sobic001G234100 Sobic005G101000--Sobic001G234100 Sobic005G101000--Sobic001G395900 Sobic005G101000--Sobic008G058600 Sobic008G084800 Sobic008G084800 Sobic005G101000--Sobic008G084800 Sobic006G047200 Sobic006G047200 Sobic005G101000--Sobic006G047200 Sobic005G212800 Sobic005G212800 Sobic005G101000--Sobic005G212800 Sobic005G205400 Sobic005G205400 Sobic005G101000--Sobic005G205400 Sobic005G101000--Sobic004G299500 Sobic005G101000--Sobic007G202480 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic005G069332 Sobic005G069332 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic004G299500--Sobic008G058600 Sobic008G058600--Sobic005G101000 Sobic003G045650 Sobic003G045650 Sobic008G058600--Sobic003G045650 Sobic008G058600--Sobic001G395900 Sobic008G058600--Sobic004G299500 Sobic008G058600--Sobic001G234100 Sobic005G176600 Sobic005G176600 Sobic008G058600--Sobic005G176600 Sobic008G058600--Sobic007G202480 Sobic008G058600--Sobic006G230100 Sobic008G058600--Sobic006G229901 Sobic007G202480--Sobic001G395900 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic007G202480--Sobic001G153100 Sobic007G202480--Sobic006G230200 Sobic007G202480--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic007G202480--Sobic008G105800 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic001G153100--Sobic006G229901 Sobic002G063700 Sobic002G063700 Sobic001G153100--Sobic002G063700 Sobic001G153100--Sobic001G395900 Sobic001G415100 Sobic001G415100 Sobic001G153100--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic001G153100--Sobic002G289500 Sobic001G181600 Sobic001G181600 Sobic003G154500--Sobic001G181600 Sobic005G119900 Sobic005G119900 Sobic003G154500--Sobic005G119900 Sobic003G154500--Sobic001G395900 Sobic003G154500--Sobic006G230200 Sobic003G154500--Sobic007G202480 Sobic003G154500--Sobic009G055300 Sobic003G154500--Sobic006G230100 Sobic001G218400 Sobic001G218400 Sobic003G154500--Sobic001G218400 Sobic003G154500--Sobic004G261500
Octagon: transcription factors


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