Gene annotation
Transcriptome id Sobic.001G395900.2,Sobic.001G395900.1
Synonym NAS4, Sb01g037480, ATNAS4
Functional annotation Nicotianamine synthase 4( (PubMedID : 26759170,(PubMedID : 24597475)
nicotianamine synthase, putative, expressed
UniProt A0A1B6QNM7 , A0A1B6QNM9
Pfam PF03059
Panther DB PTHR32266 PTHR32266:SF10
NCBI CDD -
KEGG Orthology K05953; nicotianamine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56430 : nicotianamine synthase 4
RAP-DB (Rice) LOC_Os03g19420.2 : nicotianamine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a052560 , Zm00025a002136 , Zm00025a002135 , Zm00025a052561 , Zm00025a052573
Brachypodium PNT66354 , KQJ99812 , PNT67108
Barley HORVU2Hr1G004960.5 , HORVU4Hr1G053790.2 , HORVU2Hr1G004960.4 , HORVU4Hr1G053850.3 , HORVU4Hr1G053850.2 , HORVU4Hr1G053770.1 , HORVU6Hr1G032290.1 , HORVU6Hr1G090040.1 , HORVU6Hr1G090040.3 , HORVU6Hr1G090040.2 , HORVU0Hr1G017720.1 , HORVU2Hr1G004960.6 , HORVU2Hr1G004960.3 , HORVU2Hr1G004960.2 , HORVU2Hr1G004960.1 , HORVU2Hr1G004960.9 , HORVU2Hr1G004960.8 , HORVU2Hr1G004960.10 , HORVU4Hr1G053790.1 , HORVU6Hr1G090180.2
Wheat TraesCS3D02G055800 , TraesCS6A02G163200 , TraesCS2B02G047100 , TraesCS2B02G047100 , TraesCS2D02G033000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G202480 - -
2 Sobic.004G299500 - -
3 Sobic.005G101000 - -
4 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.008G058600 protein kinase family protein, putative, expressed -
7 Sobic.006G229901 - -
8 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
9 Sobic.005G069166 - -
10 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
11 Sobic.001G234100 expressed protein -
12 Sobic.005G069332 - -
13 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G045650 - -
15 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.007G015000 methyltransferase domain containing protein, expressed -
17 Sobic.005G205400 - -
18 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
19 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.008G105800 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic001G395900 Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic001G395900--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic001G395900--Sobic004G299500 Sobic005G101000 Sobic005G101000 Sobic001G395900--Sobic005G101000 Sobic006G230100 Sobic006G230100 Sobic001G395900--Sobic006G230100 Sobic006G230200 Sobic006G230200 Sobic001G395900--Sobic006G230200 Sobic008G058600 Sobic008G058600 Sobic001G395900--Sobic008G058600 Sobic006G229901 Sobic006G229901 Sobic001G395900--Sobic006G229901 Sobic004G261500 Sobic004G261500 Sobic001G395900--Sobic004G261500 Sobic005G069166 Sobic005G069166 Sobic001G395900--Sobic005G069166 Sobic007G202480--Sobic001G395900 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic001G153100 Sobic001G153100 Sobic007G202480--Sobic001G153100 Sobic007G202480--Sobic006G230200 Sobic005G069332 Sobic005G069332 Sobic007G202480--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic007G202480--Sobic008G105800 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic007G015000 Sobic007G015000 Sobic004G299500--Sobic007G015000 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic004G299500--Sobic008G058600 Sobic001G234100 Sobic001G234100 Sobic005G101000--Sobic001G234100 Sobic005G101000--Sobic001G395900 Sobic005G101000--Sobic008G058600 Sobic008G084800 Sobic008G084800 Sobic005G101000--Sobic008G084800 Sobic006G047200 Sobic006G047200 Sobic005G101000--Sobic006G047200 Sobic005G212800 Sobic005G212800 Sobic005G101000--Sobic005G212800 Sobic005G205400 Sobic005G205400 Sobic005G101000--Sobic005G205400 Sobic005G101000--Sobic004G299500 Sobic005G101000--Sobic007G202480 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic008G058600--Sobic005G101000 Sobic003G045650 Sobic003G045650 Sobic008G058600--Sobic003G045650 Sobic008G058600--Sobic001G395900 Sobic008G058600--Sobic004G299500 Sobic008G058600--Sobic001G234100 Sobic005G176600 Sobic005G176600 Sobic008G058600--Sobic005G176600 Sobic008G058600--Sobic007G202480 Sobic008G058600--Sobic006G230100 Sobic008G058600--Sobic006G229901 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic006G229901--Sobic003G045650 Sobic006G229901--Sobic001G395900 Sobic006G229901--Sobic006G230100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332 Sobic004G261500--Sobic001G395900 Sobic004G261500--Sobic005G101000 Sobic004G261500--Sobic006G230100 Sobic004G261500--Sobic004G299500 Sobic004G261500--Sobic008G058600 Sobic004G261500--Sobic007G202480 Sobic004G261500--Sobic006G230200 Sobic004G261500--Sobic001G153100 Sobic003G154500 Sobic003G154500 Sobic004G261500--Sobic003G154500 Sobic005G069166--Sobic004G299500 Sobic005G069166--Sobic005G069332 Sobic005G069166--Sobic006G230100 Sobic005G069166--Sobic007G202480 Sobic005G069166--Sobic001G153100 Sobic005G069166--Sobic006G229901 Sobic005G069166--Sobic008G105800 Sobic005G069166--Sobic001G395900 Sobic005G069166--Sobic007G015000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.