Gene annotation
Transcriptome id Sobic.006G230100.1
Synonym Sb06g029790, RK1, ARK1
Functional annotation TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5YGP5
Pfam PF08276 PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF45
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os04g54130.1 : TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a009644 , Zm00025a009640
Brachypodium -
Barley HORVU2Hr1G116880.23 , HORVU2Hr1G116880.21 , HORVU2Hr1G116880.25 , HORVU2Hr1G116880.24 , HORVU2Hr1G116880.29 , HORVU2Hr1G116880.30 , HORVU2Hr1G116880.18 , HORVU2Hr1G116880.27 , HORVU2Hr1G116880.28 , HORVU2Hr1G108690.2 , HORVU2Hr1G108690.1
Wheat TraesCS2D02G534400 , TraesCS2D02G536400 , TraesCS2D02G536400 , TraesCS2A02G532600 , TraesCS2D02G535600 , TraesCS2D02G535600 , TraesCS2B02G563400 , TraesCS2B02G564400 , TraesCS2D02G486400 , TraesCS2B02G563400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G299500 - -
2 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
3 Sobic.007G202480 - -
4 Sobic.007G015000 methyltransferase domain containing protein, expressed -
5 Sobic.005G069166 - -
6 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
9 Sobic.006G229901 - -
10 Sobic.005G069332 - -
11 Sobic.001G415100 terpene synthase, putative, expressed -
12 Sobic.008G105800 cytochrome P450, putative, expressed -
13 Sobic.008G058600 protein kinase family protein, putative, expressed -
14 Sobic.005G101000 - -
15 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
16 Sobic.002G063700 NB-ARC domain containing protein, expressed -
17 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
18 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
19 Sobic.006G171100 expansin precursor, putative, expressed -
20 Sobic.006G121000 purine permease, putative, expressed -


Gene co-expression network
sample Sobic006G230100 Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic006G230100--Sobic004G299500 Sobic001G395900 Sobic001G395900 Sobic006G230100--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic006G230100--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic006G230100--Sobic007G015000 Sobic005G069166 Sobic005G069166 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic006G230100--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic006G230100--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic006G230100--Sobic006G229901 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic005G069332 Sobic005G069332 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic004G299500--Sobic008G058600 Sobic001G395900--Sobic007G202480 Sobic001G395900--Sobic004G299500 Sobic005G101000 Sobic005G101000 Sobic001G395900--Sobic005G101000 Sobic001G395900--Sobic006G230100 Sobic001G395900--Sobic006G230200 Sobic001G395900--Sobic008G058600 Sobic001G395900--Sobic006G229901 Sobic004G261500 Sobic004G261500 Sobic001G395900--Sobic004G261500 Sobic001G395900--Sobic005G069166 Sobic007G202480--Sobic001G395900 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic007G202480--Sobic001G153100 Sobic007G202480--Sobic006G230200 Sobic007G202480--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic007G202480--Sobic008G105800 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic007G015000--Sobic001G293100 Sobic001G415100 Sobic001G415100 Sobic007G015000--Sobic001G415100 Sobic007G212000 Sobic007G212000 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic007G015000--Sobic005G069166 Sobic007G015000--Sobic007G202480 Sobic007G015000--Sobic008G105800 Sobic005G069166--Sobic004G299500 Sobic005G069166--Sobic005G069332 Sobic005G069166--Sobic006G230100 Sobic005G069166--Sobic007G202480 Sobic005G069166--Sobic001G153100 Sobic005G069166--Sobic006G229901 Sobic005G069166--Sobic008G105800 Sobic005G069166--Sobic001G395900 Sobic005G069166--Sobic007G015000 Sobic009G055300--Sobic006G230200 Sobic009G055300--Sobic006G230100 Sobic009G055300--Sobic008G105800 Sobic002G063700 Sobic002G063700 Sobic009G055300--Sobic002G063700 Sobic009G055300--Sobic001G415100 Sobic009G055300--Sobic007G202480 Sobic009G055300--Sobic004G299500 Sobic009G055300--Sobic005G069332 Sobic009G055300--Sobic005G069166 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G153100--Sobic001G395900 Sobic001G153100--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic001G153100--Sobic002G289500 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic003G045650 Sobic003G045650 Sobic006G229901--Sobic003G045650 Sobic006G229901--Sobic001G395900 Sobic006G229901--Sobic006G230100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.