Gene annotation
Transcriptome id Sobic.001G415100.1
Synonym Sb01g039090, TPS02
Functional annotation terpene synthase, putative, expressed
UniProt C5WPA0
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT4G16730 : terpene synthase 02
RAP-DB (Rice) LOC_Os03g24690.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G015000 methyltransferase domain containing protein, expressed -
2 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
3 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.002G063700 NB-ARC domain containing protein, expressed -
6 Sobic.004G299500 - -
7 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
9 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
10 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
11 Sobic.005G069166 - -
12 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
13 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
15 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.003G441601 - -
17 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
18 Sobic.008G105800 cytochrome P450, putative, expressed -
19 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.007G202480 - -


Gene co-expression network
sample Sobic001G415100 Sobic001G415100 Sobic007G015000 Sobic007G015000 Sobic001G415100--Sobic007G015000 Sobic002G289500 Sobic002G289500 Sobic001G415100--Sobic002G289500 Sobic006G230100 Sobic006G230100 Sobic001G415100--Sobic006G230100 Sobic009G055300 Sobic009G055300 Sobic001G415100--Sobic009G055300 Sobic002G063700 Sobic002G063700 Sobic001G415100--Sobic002G063700 Sobic004G299500 Sobic004G299500 Sobic001G415100--Sobic004G299500 Sobic005G182900 Sobic005G182900 Sobic001G415100--Sobic005G182900 Sobic001G153100 Sobic001G153100 Sobic001G415100--Sobic001G153100 Sobic005G097900 Sobic005G097900 Sobic001G415100--Sobic005G097900 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic007G015000--Sobic001G293100 Sobic007G015000--Sobic001G415100 Sobic007G212000 Sobic007G212000 Sobic007G015000--Sobic007G212000 Sobic007G015000--Sobic005G097900 Sobic005G069166 Sobic005G069166 Sobic007G015000--Sobic005G069166 Sobic007G202480 Sobic007G202480 Sobic007G015000--Sobic007G202480 Sobic008G105800 Sobic008G105800 Sobic007G015000--Sobic008G105800 Sobic002G391300 Sobic002G391300 Sobic002G289500--Sobic002G391300 Sobic002G289500--Sobic001G415100 Sobic003G441601 Sobic003G441601 Sobic002G289500--Sobic003G441601 Sobic006G171100 Sobic006G171100 Sobic002G289500--Sobic006G171100 Sobic002G289500--Sobic001G153100 Sobic009G136800 Sobic009G136800 Sobic002G289500--Sobic009G136800 Sobic002G029500 Sobic002G029500 Sobic002G289500--Sobic002G029500 Sobic002G289500--Sobic006G230100 Sobic002G289500--Sobic002G063700 Sobic006G230100--Sobic004G299500 Sobic001G395900 Sobic001G395900 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic006G230100--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic006G230100--Sobic006G229901 Sobic009G055300--Sobic006G230200 Sobic009G055300--Sobic006G230100 Sobic009G055300--Sobic008G105800 Sobic009G055300--Sobic002G063700 Sobic009G055300--Sobic001G415100 Sobic009G055300--Sobic007G202480 Sobic009G055300--Sobic004G299500 Sobic005G069332 Sobic005G069332 Sobic009G055300--Sobic005G069332 Sobic009G055300--Sobic005G069166 Sobic002G063700--Sobic009G055300 Sobic002G063700--Sobic001G153100 Sobic002G063700--Sobic001G415100 Sobic002G063700--Sobic005G069332 Sobic002G063700--Sobic009G136800 Sobic002G063700--Sobic005G069166 Sobic002G063700--Sobic006G230100 Sobic002G063700--Sobic006G230200 Sobic010G128300 Sobic010G128300 Sobic002G063700--Sobic010G128300 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic004G299500--Sobic008G058600 Sobic008G033100 Sobic008G033100 Sobic005G182900--Sobic008G033100 Sobic002G019000 Sobic002G019000 Sobic005G182900--Sobic002G019000 Sobic010G242800 Sobic010G242800 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G065700 Sobic005G065700 Sobic005G182900--Sobic005G065700 Sobic005G182800 Sobic005G182800 Sobic005G182900--Sobic005G182800 Sobic003G161400 Sobic003G161400 Sobic005G182900--Sobic003G161400 Sobic005G182900--Sobic001G293100 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G153100--Sobic001G395900 Sobic001G153100--Sobic001G415100 Sobic001G153100--Sobic002G289500 Sobic005G097900--Sobic001G293100 Sobic005G097900--Sobic007G015000 Sobic005G097900--Sobic008G033100 Sobic005G097900--Sobic002G029500 Sobic005G097900--Sobic001G415100 Sobic005G097900--Sobic010G242800 Sobic005G097900--Sobic005G182900 Sobic007G064900 Sobic007G064900 Sobic005G097900--Sobic007G064900 Sobic005G097900--Sobic004G299500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.