Gene annotation
Transcriptome id Sobic.002G392000.1
Synonym Sb02g040740
Functional annotation peroxidase precursor, putative, expressed
UniProt A0A1B6QFT1
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF52
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G33420 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os07g44550.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048923 , Zm00025a015271 , Zm00025a011084
Brachypodium KQJ86402 , KQJ86398 , PNT65315 , KQK21558 , KQK03846 , KQK18502 , KQK01442
Barley HORVU0Hr1G002840.4 , HORVU0Hr1G002840.1 , HORVU0Hr1G002840.3 , HORVU6Hr1G026230.5 , HORVU6Hr1G026230.4 , HORVU6Hr1G026230.2 , HORVU6Hr1G026230.1 , HORVU1Hr1G069000.1 , HORVU2Hr1G026420.1 , HORVU0Hr1G002840.2
Wheat TraesCS3D02G189900 , TraesCS1A02G356100 , TraesCS1B02G096200 , TraesCS2A02G148100 , TraesCS7D02G090300 , TraesCS1B02G365300 , TraesCS5D02G144300 , TraesCS5D02G144300 , TraesCS1D02G354100 , TraesCS1D02G080300 , TraesCSU02G062700 , TraesCS2B02G173300 , TraesCS7D02G195700 , TraesCS7D02G090500 , TraesCS2D02G152900 , TraesCS2D02G153000 , TraesCSU02G250800 , TraesCS1D02G318800 , TraesCS5A02G148600 , TraesCS3A02G185900 , TraesCS2D02G152800 , TraesCS6A02G052800 , TraesCS1A02G078100 , TraesCS1A02G319000 , TraesCS1B02G331300 , TraesCSU02G096700 , TraesCS7A02G094600 , TraesCS2D02G152700 , TraesCS3B02G215500 , TraesCS2B02G173400 , TraesCS2A02G147800 , TraesCS6B02G063800 , TraesCSU02G163200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.005G205400 - -
3 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.001G499900 expansin precursor, putative, expressed -
5 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.008G084800 major facilitator superfamily antiporter, putative, expressed -
7 Sobic.010G191700 cytochrome P450, putative, expressed -
8 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
9 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G234100 expressed protein -
11 Sobic.005G101000 - -
12 Sobic.002G063700 NB-ARC domain containing protein, expressed -
13 Sobic.001G348400 expressed protein -
14 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
15 Sobic.005G046400 - -
16 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
17 Sobic.005G226400 RGH1A, putative, expressed -
18 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
19 Sobic.006G171100 expansin precursor, putative, expressed -
20 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase


Gene co-expression network
sample Sobic002G392000 Sobic002G392000 Sobic010G128300 Sobic010G128300 Sobic002G392000--Sobic010G128300 Sobic005G205400 Sobic005G205400 Sobic002G392000--Sobic005G205400 Sobic006G047200 Sobic006G047200 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic009G136800 Sobic009G136800 Sobic002G392000--Sobic009G136800 Sobic008G084800 Sobic008G084800 Sobic002G392000--Sobic008G084800 Sobic010G191700 Sobic010G191700 Sobic002G392000--Sobic010G191700 Sobic010G241900 Sobic010G241900 Sobic002G392000--Sobic010G241900 Sobic002G391300 Sobic002G391300 Sobic002G392000--Sobic002G391300 Sobic010G128300--Sobic002G392000 Sobic010G128300--Sobic010G241900 Sobic010G128300--Sobic010G191700 Sobic010G128300--Sobic002G391300 Sobic005G226400 Sobic005G226400 Sobic010G128300--Sobic005G226400 Sobic005G226350 Sobic005G226350 Sobic010G128300--Sobic005G226350 Sobic005G134200 Sobic005G134200 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400 Sobic005G205400--Sobic008G084800 Sobic001G234100 Sobic001G234100 Sobic005G205400--Sobic001G234100 Sobic005G205400--Sobic006G047200 Sobic005G205400--Sobic002G392000 Sobic005G212800 Sobic005G212800 Sobic005G205400--Sobic005G212800 Sobic005G101000 Sobic005G101000 Sobic005G205400--Sobic005G101000 Sobic005G205400--Sobic010G128300 Sobic001G153100 Sobic001G153100 Sobic005G205400--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic005G205400--Sobic008G058600 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic006G047200--Sobic005G205400 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic006G047200--Sobic001G234100 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200 Sobic003G167300 Sobic003G167300 Sobic001G499900--Sobic003G167300 Sobic001G499900--Sobic002G392000 Sobic001G499900--Sobic010G241900 Sobic001G499900--Sobic007G220400 Sobic008G022100 Sobic008G022100 Sobic001G499900--Sobic008G022100 Sobic007G206800 Sobic007G206800 Sobic001G499900--Sobic007G206800 Sobic001G499900--Sobic010G191700 Sobic009G065700 Sobic009G065700 Sobic001G499900--Sobic009G065700 Sobic001G499900--Sobic006G047200 Sobic006G171100 Sobic006G171100 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic010G010000 Sobic010G010000 Sobic009G136800--Sobic010G010000 Sobic002G063700 Sobic002G063700 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic009G136800--Sobic002G392000 Sobic002G289500 Sobic002G289500 Sobic009G136800--Sobic002G289500 Sobic008G084800--Sobic001G234100 Sobic008G084800--Sobic005G205400 Sobic008G084800--Sobic005G212800 Sobic008G084800--Sobic005G101000 Sobic008G084800--Sobic006G047200 Sobic008G084800--Sobic002G392000 Sobic005G176600 Sobic005G176600 Sobic008G084800--Sobic005G176600 Sobic008G084800--Sobic008G058600 Sobic007G097550 Sobic007G097550 Sobic008G084800--Sobic007G097550 Sobic010G191700--Sobic010G241900 Sobic002G111900 Sobic002G111900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic002G391400 Sobic002G391400 Sobic010G191700--Sobic002G391400 Sobic003G441601 Sobic003G441601 Sobic010G191700--Sobic003G441601 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic010G241900--Sobic005G134200 Sobic010G241900--Sobic005G226350 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic002G391300--Sobic010G128300 Sobic002G391300--Sobic005G134200 Sobic002G391300--Sobic002G289500 Sobic002G391300--Sobic009G136800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.