Gene annotation
Transcriptome id Sobic.006G059800.1
Synonym ethylene response factor 62, SbERF62, LEP, Sb06g014800
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5YFB1
Pfam PF00847
Panther DB PTHR31677 PTHR31677:SF18
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G13910 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g32790.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044109 , Zm00025a011638 , Zm00025a029907 , Zm00025a055961 , Zm00025a049099 , Zm00025a037864 , Zm00025a048766 , Zm00025a009843
Brachypodium KQJ82336 , KQK05591 , KQK05592
Barley HORVU1Hr1G067160.1 , HORVU2Hr1G071470.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G111900 receptor-like kinase, putative, expressed -
2 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
4 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
7 Sobic.010G191700 cytochrome P450, putative, expressed -
8 Sobic.006G171100 expansin precursor, putative, expressed -
9 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
10 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
13 Sobic.005G101000 - -
14 Sobic.005G226350 - -
15 Sobic.010G191600 cytochrome P450, putative, expressed -
16 Sobic.005G226400 RGH1A, putative, expressed -
17 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
18 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
19 Sobic.001G234100 expressed protein -
20 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic006G059800 Sobic006G059800 Sobic002G111900 Sobic002G111900 Sobic006G059800--Sobic002G111900 Sobic006G047200 Sobic006G047200 Sobic006G059800--Sobic006G047200 Sobic005G035900 Sobic005G035900 Sobic006G059800--Sobic005G035900 Sobic002G391300 Sobic002G391300 Sobic006G059800--Sobic002G391300 Sobic002G392000 Sobic002G392000 Sobic006G059800--Sobic002G392000 Sobic010G010000 Sobic010G010000 Sobic006G059800--Sobic010G010000 Sobic010G191700 Sobic010G191700 Sobic006G059800--Sobic010G191700 Sobic006G171100 Sobic006G171100 Sobic006G059800--Sobic006G171100 Sobic010G241900 Sobic010G241900 Sobic006G059800--Sobic010G241900 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic003G441601 Sobic003G441601 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic005G046400 Sobic005G046400 Sobic002G111900--Sobic005G046400 Sobic002G111900--Sobic006G059800 Sobic006G047200--Sobic005G035900 Sobic005G205400 Sobic005G205400 Sobic006G047200--Sobic005G205400 Sobic008G084800 Sobic008G084800 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic009G136800 Sobic009G136800 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic005G134200 Sobic005G134200 Sobic006G047200--Sobic005G134200 Sobic005G035900--Sobic006G047200 Sobic005G035900--Sobic010G241900 Sobic005G035900--Sobic002G111900 Sobic005G035900--Sobic007G220400 Sobic005G035900--Sobic006G059800 Sobic005G035900--Sobic002G392000 Sobic005G035900--Sobic005G134200 Sobic005G035900--Sobic006G171100 Sobic005G035900--Sobic002G391300 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic010G128300 Sobic010G128300 Sobic002G391300--Sobic010G128300 Sobic002G391300--Sobic005G134200 Sobic002G289500 Sobic002G289500 Sobic002G391300--Sobic002G289500 Sobic002G391300--Sobic009G136800 Sobic002G392000--Sobic010G128300 Sobic002G392000--Sobic005G205400 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic002G392000--Sobic009G136800 Sobic002G392000--Sobic008G084800 Sobic002G392000--Sobic010G191700 Sobic002G392000--Sobic010G241900 Sobic002G392000--Sobic002G391300 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic010G191700--Sobic010G241900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic002G391400 Sobic002G391400 Sobic010G191700--Sobic002G391400 Sobic010G191700--Sobic003G441601 Sobic007G206800 Sobic007G206800 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic006G171100--Sobic010G010000 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic006G171100--Sobic005G226400 Sobic006G171100--Sobic006G047200 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic010G241900--Sobic005G134200 Sobic005G226350 Sobic005G226350 Sobic010G241900--Sobic005G226350
Octagon: transcription factors


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