Gene annotation
Transcriptome id Sobic.010G010000.1
Synonym
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt A0A194YGP4
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50150 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os08g26820.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G171100 expansin precursor, putative, expressed -
2 Sobic.002G111900 receptor-like kinase, putative, expressed -
3 Sobic.003G441601 - -
4 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
8 Sobic.005G226400 RGH1A, putative, expressed -
9 Sobic.002G063700 NB-ARC domain containing protein, expressed -
10 Sobic.009G065700 - -
11 Sobic.005G046400 - -
12 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
14 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.010G191700 cytochrome P450, putative, expressed -
16 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
17 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
19 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic010G010000 Sobic010G010000 Sobic006G171100 Sobic006G171100 Sobic010G010000--Sobic006G171100 Sobic002G111900 Sobic002G111900 Sobic010G010000--Sobic002G111900 Sobic003G441601 Sobic003G441601 Sobic010G010000--Sobic003G441601 Sobic002G391300 Sobic002G391300 Sobic010G010000--Sobic002G391300 Sobic009G136800 Sobic009G136800 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic002G289500 Sobic002G289500 Sobic010G010000--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic006G171100--Sobic010G010000 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic005G046400 Sobic005G046400 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic006G171100--Sobic005G226400 Sobic006G047200 Sobic006G047200 Sobic006G171100--Sobic006G047200 Sobic010G191700 Sobic010G191700 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic010G241900 Sobic010G241900 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic003G441601--Sobic002G391300 Sobic003G441601--Sobic005G046400 Sobic003G441601--Sobic002G111900 Sobic003G441601--Sobic006G171100 Sobic003G441601--Sobic010G010000 Sobic003G441800 Sobic003G441800 Sobic003G441601--Sobic003G441800 Sobic003G441601--Sobic002G289500 Sobic003G441601--Sobic010G191700 Sobic004G014600 Sobic004G014600 Sobic003G441601--Sobic004G014600 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic010G128300 Sobic010G128300 Sobic002G391300--Sobic010G128300 Sobic005G134200 Sobic005G134200 Sobic002G391300--Sobic005G134200 Sobic002G391300--Sobic002G289500 Sobic002G391300--Sobic009G136800 Sobic009G136800--Sobic006G171100 Sobic009G136800--Sobic002G391300 Sobic009G136800--Sobic005G226400 Sobic009G136800--Sobic010G010000 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic009G136800--Sobic006G047200 Sobic002G392000 Sobic002G392000 Sobic009G136800--Sobic002G392000 Sobic009G136800--Sobic002G289500 Sobic006G230200 Sobic006G230200 Sobic009G055300--Sobic006G230200 Sobic006G230100 Sobic006G230100 Sobic009G055300--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic009G055300--Sobic008G105800 Sobic009G055300--Sobic002G063700 Sobic001G415100 Sobic001G415100 Sobic009G055300--Sobic001G415100 Sobic007G202480 Sobic007G202480 Sobic009G055300--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic009G055300--Sobic004G299500 Sobic005G069332 Sobic005G069332 Sobic009G055300--Sobic005G069332 Sobic005G069166 Sobic005G069166 Sobic009G055300--Sobic005G069166 Sobic002G289500--Sobic002G391300 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic002G289500--Sobic001G153100 Sobic002G289500--Sobic009G136800 Sobic002G029500 Sobic002G029500 Sobic002G289500--Sobic002G029500 Sobic002G289500--Sobic006G230100 Sobic002G289500--Sobic002G063700 Sobic005G226400--Sobic005G134200 Sobic005G226400--Sobic009G136800 Sobic005G226400--Sobic010G128300 Sobic005G226400--Sobic002G391300 Sobic005G226400--Sobic006G171100 Sobic005G223700 Sobic005G223700 Sobic005G226400--Sobic005G223700 Sobic005G226400--Sobic006G047200 Sobic005G226350 Sobic005G226350 Sobic005G226400--Sobic005G226350 Sobic005G226400--Sobic010G010000 Sobic002G063700--Sobic009G055300 Sobic002G063700--Sobic001G153100 Sobic002G063700--Sobic001G415100 Sobic002G063700--Sobic005G069332 Sobic002G063700--Sobic009G136800 Sobic002G063700--Sobic005G069166 Sobic002G063700--Sobic006G230100 Sobic002G063700--Sobic006G230200 Sobic002G063700--Sobic010G128300
Octagon: transcription factors


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