Gene annotation
Transcriptome id Sobic.009G065700.1
Synonym
Functional annotation -
UniProt A0A1B6P6X7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
3 Sobic.002G111900 receptor-like kinase, putative, expressed -
4 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
5 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
6 Sobic.001G499900 expansin precursor, putative, expressed -
7 Sobic.003G441601 - -
8 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
9 Sobic.001G348400 expressed protein -
10 Sobic.010G191600 cytochrome P450, putative, expressed -
11 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
13 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
15 Sobic.005G046400 - -
16 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
17 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
18 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G065700 Sobic009G065700 Sobic003G167300 Sobic003G167300 Sobic009G065700--Sobic003G167300 Sobic003G441800 Sobic003G441800 Sobic009G065700--Sobic003G441800 Sobic002G111900 Sobic002G111900 Sobic009G065700--Sobic002G111900 Sobic010G010000 Sobic010G010000 Sobic009G065700--Sobic010G010000 Sobic002G289500 Sobic002G289500 Sobic009G065700--Sobic002G289500 Sobic001G499900 Sobic001G499900 Sobic009G065700--Sobic001G499900 Sobic003G441601 Sobic003G441601 Sobic009G065700--Sobic003G441601 Sobic010G241900 Sobic010G241900 Sobic009G065700--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic009G065700--Sobic001G348400 Sobic003G167300--Sobic001G499900 Sobic006G205700 Sobic006G205700 Sobic003G167300--Sobic006G205700 Sobic008G022100 Sobic008G022100 Sobic003G167300--Sobic008G022100 Sobic003G167300--Sobic009G065700 Sobic003G167300--Sobic003G441800 Sobic002G391400 Sobic002G391400 Sobic003G167300--Sobic002G391400 Sobic003G167300--Sobic010G241900 Sobic003G167300--Sobic001G348400 Sobic003G095100 Sobic003G095100 Sobic003G167300--Sobic003G095100 Sobic003G053200 Sobic003G053200 Sobic003G441800--Sobic003G053200 Sobic003G441700 Sobic003G441700 Sobic003G441800--Sobic003G441700 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic004G121600 Sobic004G121600 Sobic003G441800--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic003G441800--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic003G441800--Sobic007G037600 Sobic003G441800--Sobic009G065700 Sobic010G191700 Sobic010G191700 Sobic002G111900--Sobic010G191700 Sobic002G391300 Sobic002G391300 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic006G171100 Sobic006G171100 Sobic002G111900--Sobic006G171100 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic009G136800 Sobic009G136800 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic002G289500--Sobic002G391300 Sobic001G415100 Sobic001G415100 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic002G289500--Sobic001G153100 Sobic002G289500--Sobic009G136800 Sobic002G029500 Sobic002G029500 Sobic002G289500--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic002G289500--Sobic006G230100 Sobic002G289500--Sobic002G063700 Sobic001G499900--Sobic003G167300 Sobic002G392000 Sobic002G392000 Sobic001G499900--Sobic002G392000 Sobic001G499900--Sobic010G241900 Sobic001G499900--Sobic007G220400 Sobic001G499900--Sobic008G022100 Sobic007G206800 Sobic007G206800 Sobic001G499900--Sobic007G206800 Sobic001G499900--Sobic010G191700 Sobic001G499900--Sobic009G065700 Sobic006G047200 Sobic006G047200 Sobic001G499900--Sobic006G047200 Sobic003G441601--Sobic002G391300 Sobic003G441601--Sobic005G046400 Sobic003G441601--Sobic002G111900 Sobic003G441601--Sobic006G171100 Sobic003G441601--Sobic010G010000 Sobic003G441601--Sobic003G441800 Sobic003G441601--Sobic002G289500 Sobic003G441601--Sobic010G191700 Sobic004G014600 Sobic004G014600 Sobic003G441601--Sobic004G014600 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G128300 Sobic010G128300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic010G241900--Sobic002G111900 Sobic005G134200 Sobic005G134200 Sobic010G241900--Sobic005G134200 Sobic005G226350 Sobic005G226350 Sobic010G241900--Sobic005G226350 Sobic001G348400--Sobic002G392000 Sobic001G348400--Sobic001G153100 Sobic001G348400--Sobic002G063700 Sobic001G348400--Sobic005G046400 Sobic001G348400--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic001G348400--Sobic006G230200 Sobic001G348400--Sobic009G065700 Sobic001G348400--Sobic003G167300 Sobic001G348400--Sobic010G128300
Octagon: transcription factors


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