Gene annotation
Transcriptome id Sobic.001G348400.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QMS4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g27690.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
3 Sobic.002G063700 NB-ARC domain containing protein, expressed -
4 Sobic.005G046400 - -
5 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.009G065700 - -
8 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G499900 expansin precursor, putative, expressed -
11 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
12 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
14 Sobic.002G118801 - -
15 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
16 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
17 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
18 Sobic.003G441601 - -
19 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.001G415100 terpene synthase, putative, expressed -


Gene co-expression network
sample Sobic001G348400 Sobic001G348400 Sobic002G392000 Sobic002G392000 Sobic001G348400--Sobic002G392000 Sobic001G153100 Sobic001G153100 Sobic001G348400--Sobic001G153100 Sobic002G063700 Sobic002G063700 Sobic001G348400--Sobic002G063700 Sobic005G046400 Sobic005G046400 Sobic001G348400--Sobic005G046400 Sobic009G055300 Sobic009G055300 Sobic001G348400--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic001G348400--Sobic006G230200 Sobic009G065700 Sobic009G065700 Sobic001G348400--Sobic009G065700 Sobic003G167300 Sobic003G167300 Sobic001G348400--Sobic003G167300 Sobic010G128300 Sobic010G128300 Sobic001G348400--Sobic010G128300 Sobic002G392000--Sobic010G128300 Sobic005G205400 Sobic005G205400 Sobic002G392000--Sobic005G205400 Sobic006G047200 Sobic006G047200 Sobic002G392000--Sobic006G047200 Sobic001G499900 Sobic001G499900 Sobic002G392000--Sobic001G499900 Sobic009G136800 Sobic009G136800 Sobic002G392000--Sobic009G136800 Sobic008G084800 Sobic008G084800 Sobic002G392000--Sobic008G084800 Sobic010G191700 Sobic010G191700 Sobic002G392000--Sobic010G191700 Sobic010G241900 Sobic010G241900 Sobic002G392000--Sobic010G241900 Sobic002G391300 Sobic002G391300 Sobic002G392000--Sobic002G391300 Sobic007G202480 Sobic007G202480 Sobic001G153100--Sobic007G202480 Sobic005G069166 Sobic005G069166 Sobic001G153100--Sobic005G069166 Sobic006G230100 Sobic006G230100 Sobic001G153100--Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic001G153100--Sobic004G299500 Sobic006G229901 Sobic006G229901 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G395900 Sobic001G395900 Sobic001G153100--Sobic001G395900 Sobic001G415100 Sobic001G415100 Sobic001G153100--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic001G153100--Sobic002G289500 Sobic002G063700--Sobic009G055300 Sobic002G063700--Sobic001G153100 Sobic002G063700--Sobic001G415100 Sobic005G069332 Sobic005G069332 Sobic002G063700--Sobic005G069332 Sobic002G063700--Sobic009G136800 Sobic002G063700--Sobic005G069166 Sobic002G063700--Sobic006G230100 Sobic002G063700--Sobic006G230200 Sobic002G063700--Sobic010G128300 Sobic003G441601 Sobic003G441601 Sobic005G046400--Sobic003G441601 Sobic003G441800 Sobic003G441800 Sobic005G046400--Sobic003G441800 Sobic005G046400--Sobic002G391300 Sobic006G171100 Sobic006G171100 Sobic005G046400--Sobic006G171100 Sobic002G111900 Sobic002G111900 Sobic005G046400--Sobic002G111900 Sobic005G046400--Sobic010G191700 Sobic006G205700 Sobic006G205700 Sobic005G046400--Sobic006G205700 Sobic005G046400--Sobic010G241900 Sobic005G046400--Sobic009G136800 Sobic009G055300--Sobic006G230200 Sobic009G055300--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic009G055300--Sobic008G105800 Sobic009G055300--Sobic002G063700 Sobic009G055300--Sobic001G415100 Sobic009G055300--Sobic007G202480 Sobic009G055300--Sobic004G299500 Sobic009G055300--Sobic005G069332 Sobic009G055300--Sobic005G069166 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic009G065700--Sobic003G167300 Sobic009G065700--Sobic003G441800 Sobic009G065700--Sobic002G111900 Sobic010G010000 Sobic010G010000 Sobic009G065700--Sobic010G010000 Sobic009G065700--Sobic002G289500 Sobic009G065700--Sobic001G499900 Sobic009G065700--Sobic003G441601 Sobic009G065700--Sobic010G241900 Sobic009G065700--Sobic001G348400 Sobic003G167300--Sobic001G499900 Sobic003G167300--Sobic006G205700 Sobic008G022100 Sobic008G022100 Sobic003G167300--Sobic008G022100 Sobic003G167300--Sobic009G065700 Sobic003G167300--Sobic003G441800 Sobic002G391400 Sobic002G391400 Sobic003G167300--Sobic002G391400 Sobic003G167300--Sobic010G241900 Sobic003G167300--Sobic001G348400 Sobic003G095100 Sobic003G095100 Sobic003G167300--Sobic003G095100 Sobic010G128300--Sobic002G392000 Sobic010G128300--Sobic010G241900 Sobic010G128300--Sobic010G191700 Sobic010G128300--Sobic002G391300 Sobic005G226400 Sobic005G226400 Sobic010G128300--Sobic005G226400 Sobic005G226350 Sobic005G226350 Sobic010G128300--Sobic005G226350 Sobic005G134200 Sobic005G134200 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400
Octagon: transcription factors


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