Gene annotation
Transcriptome id Sobic.001G499900.1
Synonym ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, Sb01g046700, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5WXU1
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g06000.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000709 , Zm00025a052244 , Zm00025a024073 , Zm00025a040298 , Zm00025a019856 , Zm00025a050298 , Zm00025a055602
Brachypodium KQJ81960 , KQJ96854 , KQK03595 , KQJ97590 , KQK21504
Barley HORVU3Hr1G076670.2 , HORVU2Hr1G010800.1 , HORVU3Hr1G076670.1
Wheat TraesCS3B02G348000 , TraesCS2D02G065000 , TraesCS7B02G197100 , TraesCS2B02G078800 , TraesCS2A02G066600 , TraesCS3A02G318100 , TraesCS4B02G271000 , TraesCS3D02G175800 , TraesCS4A02G034400 , TraesCS3A02G165900 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS3A02G165600 , TraesCS3B02G199900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
4 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
5 Sobic.008G022100 nucleoside-triphosphatase, putative, expressed K14641: apyrase
6 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
7 Sobic.010G191700 cytochrome P450, putative, expressed -
8 Sobic.009G065700 - -
9 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
13 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
14 Sobic.005G046400 - -
15 Sobic.002G111900 receptor-like kinase, putative, expressed -
16 Sobic.001G348400 expressed protein -
17 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
18 Sobic.006G133300 expressed protein -
19 Sobic.005G205400 - -
20 Sobic.001G414800 dirigent, putative, expressed -


Gene co-expression network
sample Sobic001G499900 Sobic001G499900 Sobic003G167300 Sobic003G167300 Sobic001G499900--Sobic003G167300 Sobic002G392000 Sobic002G392000 Sobic001G499900--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic001G499900--Sobic010G241900 Sobic007G220400 Sobic007G220400 Sobic001G499900--Sobic007G220400 Sobic008G022100 Sobic008G022100 Sobic001G499900--Sobic008G022100 Sobic007G206800 Sobic007G206800 Sobic001G499900--Sobic007G206800 Sobic010G191700 Sobic010G191700 Sobic001G499900--Sobic010G191700 Sobic009G065700 Sobic009G065700 Sobic001G499900--Sobic009G065700 Sobic006G047200 Sobic006G047200 Sobic001G499900--Sobic006G047200 Sobic003G167300--Sobic001G499900 Sobic006G205700 Sobic006G205700 Sobic003G167300--Sobic006G205700 Sobic003G167300--Sobic008G022100 Sobic003G167300--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic003G167300--Sobic003G441800 Sobic002G391400 Sobic002G391400 Sobic003G167300--Sobic002G391400 Sobic003G167300--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic003G167300--Sobic001G348400 Sobic003G095100 Sobic003G095100 Sobic003G167300--Sobic003G095100 Sobic010G128300 Sobic010G128300 Sobic002G392000--Sobic010G128300 Sobic005G205400 Sobic005G205400 Sobic002G392000--Sobic005G205400 Sobic002G392000--Sobic006G047200 Sobic002G392000--Sobic001G499900 Sobic009G136800 Sobic009G136800 Sobic002G392000--Sobic009G136800 Sobic008G084800 Sobic008G084800 Sobic002G392000--Sobic008G084800 Sobic002G392000--Sobic010G191700 Sobic002G392000--Sobic010G241900 Sobic002G391300 Sobic002G391300 Sobic002G392000--Sobic002G391300 Sobic010G241900--Sobic010G191700 Sobic010G241900--Sobic002G391400 Sobic010G241900--Sobic007G220400 Sobic010G241900--Sobic002G391300 Sobic010G241900--Sobic010G128300 Sobic010G241900--Sobic007G206800 Sobic002G111900 Sobic002G111900 Sobic010G241900--Sobic002G111900 Sobic005G134200 Sobic005G134200 Sobic010G241900--Sobic005G134200 Sobic005G226350 Sobic005G226350 Sobic010G241900--Sobic005G226350 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G220400--Sobic007G206800 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic007G220400--Sobic002G391400 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic002G334000 Sobic002G334000 Sobic007G220400--Sobic002G334000 Sobic008G022100--Sobic003G167300 Sobic008G022100--Sobic001G499900 Sobic001G414800 Sobic001G414800 Sobic008G022100--Sobic001G414800 Sobic008G022100--Sobic006G205700 Sobic008G022100--Sobic007G206800 Sobic008G022100--Sobic007G220400 Sobic008G022100--Sobic002G391400 Sobic005G097400 Sobic005G097400 Sobic008G022100--Sobic005G097400 Sobic008G022100--Sobic010G241900 Sobic007G206800--Sobic002G391400 Sobic007G206800--Sobic002G334000 Sobic007G206800--Sobic007G220400 Sobic007G206800--Sobic010G241900 Sobic007G206800--Sobic010G191700 Sobic007G206800--Sobic006G205700 Sobic005G080600 Sobic005G080600 Sobic007G206800--Sobic005G080600 Sobic007G206800--Sobic002G111900 Sobic002G392100 Sobic002G392100 Sobic007G206800--Sobic002G392100 Sobic010G191700--Sobic010G241900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic010G191700--Sobic002G391400 Sobic003G441601 Sobic003G441601 Sobic010G191700--Sobic003G441601 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200 Sobic009G065700--Sobic003G167300 Sobic009G065700--Sobic003G441800 Sobic009G065700--Sobic002G111900 Sobic010G010000 Sobic010G010000 Sobic009G065700--Sobic010G010000 Sobic002G289500 Sobic002G289500 Sobic009G065700--Sobic002G289500 Sobic009G065700--Sobic001G499900 Sobic009G065700--Sobic003G441601 Sobic009G065700--Sobic010G241900 Sobic009G065700--Sobic001G348400 Sobic005G035900 Sobic005G035900 Sobic006G047200--Sobic005G035900 Sobic006G047200--Sobic005G205400 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic001G234100 Sobic001G234100 Sobic006G047200--Sobic001G234100 Sobic005G101000 Sobic005G101000 Sobic006G047200--Sobic005G101000 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200
Octagon: transcription factors


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