Gene annotation
Transcriptome id Sobic.001G181600.1
Synonym Sb01g015790, HSD1, ATHSD1
Functional annotation dehydrogenase/reductase, putative, expressed
UniProt A0A1B6QJL0
Pfam PF08659
Panther DB PTHR24322 PTHR24322:SF381
NCBI CDD KOG1205; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50600 : hydroxysteroid dehydrogenase 1
RAP-DB (Rice) LOC_Os02g30714.1 : dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) Zm00025a011743 , Zm00025a007107
Brachypodium KQJ86780 , PNT62743 , PNT62742 , KQJ88487 , KQJ99593
Barley HORVU5Hr1G013510.10 , HORVU5Hr1G013510.8 , HORVU5Hr1G013510.1 , HORVU5Hr1G013510.3 , HORVU5Hr1G013510.2
Wheat TraesCS5A02G054900 , TraesCS5B02G061600 , TraesCS5B02G559400 , TraesCS4A02G319700 , TraesCS4A02G319700 , TraesCS5D02G066100 , TraesCS5D02G565600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
3 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
5 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
6 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.007G202480 - -
9 Sobic.007G015000 methyltransferase domain containing protein, expressed -
10 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
11 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
14 Sobic.004G121600 expansin precursor, putative, expressed -
15 Sobic.008G105800 cytochrome P450, putative, expressed -
16 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
17 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
18 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
19 Sobic.004G299500 - -
20 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity


Gene co-expression network
sample Sobic001G181600 Sobic001G181600 Sobic003G154500 Sobic003G154500 Sobic001G181600--Sobic003G154500 Sobic005G119900 Sobic005G119900 Sobic001G181600--Sobic005G119900 Sobic003G441700 Sobic003G441700 Sobic001G181600--Sobic003G441700 Sobic006G097900 Sobic006G097900 Sobic001G181600--Sobic006G097900 Sobic001G218400 Sobic001G218400 Sobic001G181600--Sobic001G218400 Sobic009G055300 Sobic009G055300 Sobic001G181600--Sobic009G055300 Sobic007G212000 Sobic007G212000 Sobic001G181600--Sobic007G212000 Sobic007G202480 Sobic007G202480 Sobic001G181600--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic001G181600--Sobic007G015000 Sobic003G154500--Sobic001G181600 Sobic003G154500--Sobic005G119900 Sobic001G395900 Sobic001G395900 Sobic003G154500--Sobic001G395900 Sobic006G230200 Sobic006G230200 Sobic003G154500--Sobic006G230200 Sobic003G154500--Sobic007G202480 Sobic003G154500--Sobic009G055300 Sobic006G230100 Sobic006G230100 Sobic003G154500--Sobic006G230100 Sobic003G154500--Sobic001G218400 Sobic004G261500 Sobic004G261500 Sobic003G154500--Sobic004G261500 Sobic005G119900--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic005G119900--Sobic001G301000 Sobic005G119900--Sobic001G181600 Sobic004G121600 Sobic004G121600 Sobic005G119900--Sobic004G121600 Sobic003G441800 Sobic003G441800 Sobic005G119900--Sobic003G441800 Sobic003G053200 Sobic003G053200 Sobic005G119900--Sobic003G053200 Sobic005G119900--Sobic003G154500 Sobic005G119900--Sobic009G055300 Sobic001G231800 Sobic001G231800 Sobic005G119900--Sobic001G231800 Sobic003G441700--Sobic005G119900 Sobic003G441700--Sobic003G053200 Sobic003G441700--Sobic003G441800 Sobic003G441700--Sobic004G121600 Sobic003G441700--Sobic001G301000 Sobic003G441700--Sobic009G055300 Sobic003G441700--Sobic001G181600 Sobic003G441700--Sobic006G097900 Sobic003G441700--Sobic001G231800 Sobic006G097900--Sobic004G121600 Sobic010G268700 Sobic010G268700 Sobic006G097900--Sobic010G268700 Sobic006G097900--Sobic003G441700 Sobic006G097900--Sobic001G181600 Sobic006G097900--Sobic001G218400 Sobic005G216600 Sobic005G216600 Sobic006G097900--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic006G097900--Sobic001G293100 Sobic006G097900--Sobic003G441800 Sobic006G097900--Sobic005G119900 Sobic001G218400--Sobic006G097900 Sobic001G218400--Sobic004G121600 Sobic001G218400--Sobic001G181600 Sobic001G218400--Sobic003G441800 Sobic010G191600 Sobic010G191600 Sobic001G218400--Sobic010G191600 Sobic001G218400--Sobic003G154500 Sobic001G218400--Sobic003G441700 Sobic010G010000 Sobic010G010000 Sobic001G218400--Sobic010G010000 Sobic001G218400--Sobic005G119900 Sobic009G055300--Sobic006G230200 Sobic009G055300--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic009G055300--Sobic008G105800 Sobic002G063700 Sobic002G063700 Sobic009G055300--Sobic002G063700 Sobic001G415100 Sobic001G415100 Sobic009G055300--Sobic001G415100 Sobic009G055300--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic009G055300--Sobic004G299500 Sobic005G069332 Sobic005G069332 Sobic009G055300--Sobic005G069332 Sobic005G069166 Sobic005G069166 Sobic009G055300--Sobic005G069166 Sobic007G212000--Sobic007G015000 Sobic007G212000--Sobic006G230100 Sobic007G212000--Sobic008G105800 Sobic005G216400 Sobic005G216400 Sobic007G212000--Sobic005G216400 Sobic006G121000 Sobic006G121000 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic005G060200 Sobic005G060200 Sobic007G212000--Sobic005G060200 Sobic007G212000--Sobic001G181600 Sobic007G202480--Sobic001G395900 Sobic006G229901 Sobic006G229901 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic001G153100 Sobic001G153100 Sobic007G202480--Sobic001G153100 Sobic007G202480--Sobic006G230200 Sobic007G202480--Sobic005G069332 Sobic007G202480--Sobic008G105800 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic007G015000--Sobic001G293100 Sobic007G015000--Sobic001G415100 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic007G015000--Sobic005G069166 Sobic007G015000--Sobic007G202480 Sobic007G015000--Sobic008G105800
Octagon: transcription factors


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