Gene annotation
Transcriptome id Sobic.001G218400.1
Synonym Sb01g019200
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
MATH domain containing protein, expressed
UniProt C5WYE2
Pfam PF00917
Panther DB -
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G17380 : TRAF-like family protein
RAP-DB (Rice) LOC_Os10g33830.1 : MATH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006590
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
2 Sobic.004G121600 expansin precursor, putative, expressed -
3 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
4 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
5 Sobic.010G191600 cytochrome P450, putative, expressed -
6 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
8 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
9 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
10 Sobic.002G111900 receptor-like kinase, putative, expressed -
11 Sobic.003G441601 - -
12 Sobic.006G171100 expansin precursor, putative, expressed -
13 Sobic.009G065700 - -
14 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
15 Sobic.005G046400 - -
16 Sobic.005G217766 - -
17 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
19 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.004G119800 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G218400 Sobic001G218400 Sobic006G097900 Sobic006G097900 Sobic001G218400--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic001G218400--Sobic004G121600 Sobic001G181600 Sobic001G181600 Sobic001G218400--Sobic001G181600 Sobic003G441800 Sobic003G441800 Sobic001G218400--Sobic003G441800 Sobic010G191600 Sobic010G191600 Sobic001G218400--Sobic010G191600 Sobic003G154500 Sobic003G154500 Sobic001G218400--Sobic003G154500 Sobic003G441700 Sobic003G441700 Sobic001G218400--Sobic003G441700 Sobic010G010000 Sobic010G010000 Sobic001G218400--Sobic010G010000 Sobic005G119900 Sobic005G119900 Sobic001G218400--Sobic005G119900 Sobic006G097900--Sobic004G121600 Sobic010G268700 Sobic010G268700 Sobic006G097900--Sobic010G268700 Sobic006G097900--Sobic003G441700 Sobic006G097900--Sobic001G181600 Sobic006G097900--Sobic001G218400 Sobic005G216600 Sobic005G216600 Sobic006G097900--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic006G097900--Sobic001G293100 Sobic006G097900--Sobic003G441800 Sobic006G097900--Sobic005G119900 Sobic004G121600--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic004G121600--Sobic001G301000 Sobic004G121600--Sobic006G097900 Sobic004G121600--Sobic005G119900 Sobic003G053200 Sobic003G053200 Sobic004G121600--Sobic003G053200 Sobic004G121600--Sobic003G441800 Sobic008G010500 Sobic008G010500 Sobic004G121600--Sobic008G010500 Sobic004G121600--Sobic001G218400 Sobic004G121800 Sobic004G121800 Sobic004G121600--Sobic004G121800 Sobic001G181600--Sobic003G154500 Sobic001G181600--Sobic005G119900 Sobic001G181600--Sobic003G441700 Sobic001G181600--Sobic006G097900 Sobic001G181600--Sobic001G218400 Sobic009G055300 Sobic009G055300 Sobic001G181600--Sobic009G055300 Sobic007G212000 Sobic007G212000 Sobic001G181600--Sobic007G212000 Sobic007G202480 Sobic007G202480 Sobic001G181600--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic001G181600--Sobic007G015000 Sobic003G441800--Sobic003G053200 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic006G205700 Sobic006G205700 Sobic003G441800--Sobic006G205700 Sobic003G441800--Sobic004G121600 Sobic003G441800--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic005G217766 Sobic005G217766 Sobic010G191600--Sobic005G217766 Sobic005G097400 Sobic005G097400 Sobic010G191600--Sobic005G097400 Sobic002G111900 Sobic002G111900 Sobic010G191600--Sobic002G111900 Sobic002G391400 Sobic002G391400 Sobic010G191600--Sobic002G391400 Sobic010G191600--Sobic006G205700 Sobic010G191600--Sobic001G218400 Sobic010G191700 Sobic010G191700 Sobic010G191600--Sobic010G191700 Sobic010G191600--Sobic003G441800 Sobic007G206800 Sobic007G206800 Sobic010G191600--Sobic007G206800 Sobic003G154500--Sobic001G181600 Sobic003G154500--Sobic005G119900 Sobic001G395900 Sobic001G395900 Sobic003G154500--Sobic001G395900 Sobic006G230200 Sobic006G230200 Sobic003G154500--Sobic006G230200 Sobic003G154500--Sobic007G202480 Sobic003G154500--Sobic009G055300 Sobic006G230100 Sobic006G230100 Sobic003G154500--Sobic006G230100 Sobic003G154500--Sobic001G218400 Sobic004G261500 Sobic004G261500 Sobic003G154500--Sobic004G261500 Sobic003G441700--Sobic005G119900 Sobic003G441700--Sobic003G053200 Sobic003G441700--Sobic003G441800 Sobic003G441700--Sobic004G121600 Sobic003G441700--Sobic001G301000 Sobic003G441700--Sobic009G055300 Sobic003G441700--Sobic001G181600 Sobic003G441700--Sobic006G097900 Sobic001G231800 Sobic001G231800 Sobic003G441700--Sobic001G231800 Sobic006G171100 Sobic006G171100 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic002G391300 Sobic002G391300 Sobic010G010000--Sobic002G391300 Sobic009G136800 Sobic009G136800 Sobic010G010000--Sobic009G136800 Sobic010G010000--Sobic009G055300 Sobic002G289500 Sobic002G289500 Sobic010G010000--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic005G119900--Sobic003G441700 Sobic005G119900--Sobic001G301000 Sobic005G119900--Sobic001G181600 Sobic005G119900--Sobic004G121600 Sobic005G119900--Sobic003G441800 Sobic005G119900--Sobic003G053200 Sobic005G119900--Sobic003G154500 Sobic005G119900--Sobic009G055300 Sobic005G119900--Sobic001G231800
Octagon: transcription factors


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