Gene annotation
Transcriptome id Sobic.003G053200.1
Synonym ATMYB86, MYB86, Sb03g004600
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XNH0
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF605
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26660 : myb domain protein 86
RAP-DB (Rice) LOC_Os01g07450.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a049626 , Zm00025a028009 , Zm00025a054415 , Zm00025a038844 , Zm00025a042466 , Zm00025a044427 , Zm00025a038916 , Zm00025a027885 , Zm00025a004957 , Zm00025a013941 , Zm00025a010442 , Zm00025a010443 , Zm00025a028816 , Zm00025a023288 , Zm00025a005685
Brachypodium KQK15034 , KQK15035 , KQJ86560 , KQK05100 , KQJ89177 , KQJ83755 , KQK05002 , KQJ83761 , KQK09372 , KQK09222 , KQK08236 , KQK00512 , KQJ90325
Barley HORVU4Hr1G082610.1 , HORVU1Hr1G078950.2 , HORVU4Hr1G082610.4 , HORVU1Hr1G078950.1 , HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU7Hr1G034630.1 , HORVU7Hr1G034630.2 , HORVU5Hr1G063410.3 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1 , HORVU1Hr1G079040.6 , HORVU1Hr1G079040.5 , HORVU1Hr1G079040.4 , HORVU1Hr1G079040.3 , HORVU1Hr1G079040.2 , HORVU1Hr1G079040.1 , HORVU2Hr1G091630.3 , HORVU2Hr1G091630.2 , HORVU1Hr1G078940.1 , HORVU3Hr1G016940.1
Wheat TraesCS1D02G371900 , TraesCS2A02G370700 , TraesCS7D02G166500 , TraesCS3D02G094500 , TraesCS2A02G370000 , TraesCS3A02G254500 , TraesCS3A02G254500 , TraesCS7A02G165700 , TraesCS1D02G371800 , TraesCS1D02G371600 , TraesCS1A02G366000 , TraesCS5D02G225800 , TraesCS2B02G387000 , TraesCS3B02G286500 , TraesCS1A02G366200 , TraesCS1B02G383700 , TraesCS1D02G371400 , TraesCS5A02G217900 , TraesCS3A02G094300 , TraesCS1B02G383800 , TraesCS5D02G113300 , TraesCS4D02G319700 , TraesCS2D02G366400 , TraesCS5B02G216900 , TraesCS7B02G070400 , TraesCS2B02G387800 , TraesCS5A02G495500 , TraesCS3B02G126800 , TraesCS1A02G366300 , TraesCS4B02G323300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
2 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
3 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
4 Sobic.004G121600 expansin precursor, putative, expressed -
5 Sobic.010G031700 thaumatin, putative, expressed -
6 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
7 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
8 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
10 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
12 Sobic.001G539200 expressed protein -
13 Sobic.004G121800 expansin precursor, putative, expressed -
14 Sobic.005G046400 - -
15 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
18 Sobic.010G268700 expansin precursor, putative, expressed -
19 Sobic.003G319400 receptor protein kinase, putative, expressed -
20 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic003G053200 Sobic003G053200 Sobic003G441800 Sobic003G441800 Sobic003G053200--Sobic003G441800 Sobic003G441700 Sobic003G441700 Sobic003G053200--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic003G053200--Sobic001G301000 Sobic004G121600 Sobic004G121600 Sobic003G053200--Sobic004G121600 Sobic010G031700 Sobic010G031700 Sobic003G053200--Sobic010G031700 Sobic005G119900 Sobic005G119900 Sobic003G053200--Sobic005G119900 Sobic004G029400 Sobic004G029400 Sobic003G053200--Sobic004G029400 Sobic001G231800 Sobic001G231800 Sobic003G053200--Sobic001G231800 Sobic007G037600 Sobic007G037600 Sobic003G053200--Sobic007G037600 Sobic003G441800--Sobic003G053200 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic006G205700 Sobic006G205700 Sobic003G441800--Sobic006G205700 Sobic003G441800--Sobic004G121600 Sobic003G441800--Sobic005G119900 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic003G441700--Sobic005G119900 Sobic003G441700--Sobic003G053200 Sobic003G441700--Sobic003G441800 Sobic003G441700--Sobic004G121600 Sobic003G441700--Sobic001G301000 Sobic009G055300 Sobic009G055300 Sobic003G441700--Sobic009G055300 Sobic001G181600 Sobic001G181600 Sobic003G441700--Sobic001G181600 Sobic006G097900 Sobic006G097900 Sobic003G441700--Sobic006G097900 Sobic003G441700--Sobic001G231800 Sobic001G301000--Sobic001G231800 Sobic008G010500 Sobic008G010500 Sobic001G301000--Sobic008G010500 Sobic001G301000--Sobic004G121600 Sobic001G301000--Sobic003G441700 Sobic001G301000--Sobic005G119900 Sobic001G301000--Sobic003G053200 Sobic010G268700 Sobic010G268700 Sobic001G301000--Sobic010G268700 Sobic010G245400 Sobic010G245400 Sobic001G301000--Sobic010G245400 Sobic001G301000--Sobic006G097900 Sobic004G121600--Sobic003G441700 Sobic004G121600--Sobic001G301000 Sobic004G121600--Sobic006G097900 Sobic004G121600--Sobic005G119900 Sobic004G121600--Sobic003G053200 Sobic004G121600--Sobic003G441800 Sobic004G121600--Sobic008G010500 Sobic001G218400 Sobic001G218400 Sobic004G121600--Sobic001G218400 Sobic004G121800 Sobic004G121800 Sobic004G121600--Sobic004G121800 Sobic010G031700--Sobic003G053200 Sobic010G031700--Sobic007G037600 Sobic010G031700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic010G031700--Sobic004G106100 Sobic010G031700--Sobic004G029400 Sobic006G003100 Sobic006G003100 Sobic010G031700--Sobic006G003100 Sobic010G031700--Sobic006G205700 Sobic002G233200 Sobic002G233200 Sobic010G031700--Sobic002G233200 Sobic003G353200 Sobic003G353200 Sobic010G031700--Sobic003G353200 Sobic005G119900--Sobic003G441700 Sobic005G119900--Sobic001G301000 Sobic005G119900--Sobic001G181600 Sobic005G119900--Sobic004G121600 Sobic005G119900--Sobic003G441800 Sobic005G119900--Sobic003G053200 Sobic003G154500 Sobic003G154500 Sobic005G119900--Sobic003G154500 Sobic005G119900--Sobic009G055300 Sobic005G119900--Sobic001G231800 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G029400--Sobic004G121600 Sobic004G029400--Sobic007G037600 Sobic001G539200 Sobic001G539200 Sobic004G029400--Sobic001G539200 Sobic009G181600 Sobic009G181600 Sobic004G029400--Sobic009G181600 Sobic003G282300 Sobic003G282300 Sobic004G029400--Sobic003G282300 Sobic004G029400--Sobic005G119900 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic003G357700 Sobic003G357700 Sobic001G231800--Sobic003G357700 Sobic007G037600--Sobic003G441800 Sobic007G037600--Sobic003G353200 Sobic007G037600--Sobic010G031700 Sobic002G146000 Sobic002G146000 Sobic007G037600--Sobic002G146000 Sobic007G037600--Sobic003G053200 Sobic007G037600--Sobic004G029400 Sobic007G037600--Sobic001G181600 Sobic007G037600--Sobic001G301000 Sobic007G037600--Sobic006G205700
Octagon: transcription factors


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