Gene annotation
Transcriptome id Sobic.001G539200.1
Synonym Sb01g050150
Functional annotation expressed protein
UniProt C5WMR5
Pfam PF03600
Panther DB PTHR10283 PTHR10283:SF107
NCBI CDD KOG2639; Sodium sulfate symporter and related arsenite permeases
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G02260 : Divalent ion symporter
RAP-DB (Rice) LOC_Os03g01700.1 : expressed protein
MaizeGDB (Corn) Zm00025a017700 , Zm00025a000142 , Zm00025a003264 , Zm00025a032761 , Zm00025a006747
Brachypodium KQK24090 , KQJ97708 , KQK01440 , PNT78202 , PNT78201 , PNT78200 , KQK23658 , PNT78199 , PNT78198
Barley HORVU1Hr1G037760.10 , HORVU1Hr1G037760.14 , HORVU1Hr1G037760.15 , HORVU4Hr1G079710.8 , HORVU4Hr1G079710.9 , HORVU4Hr1G079710.2 , HORVU4Hr1G079710.3 , HORVU4Hr1G079710.1 , HORVU4Hr1G079710.6 , HORVU4Hr1G079710.7 , HORVU4Hr1G079710.4 , HORVU4Hr1G079710.5 , HORVU1Hr1G053160.1 , HORVU1Hr1G037760.8 , HORVU1Hr1G037760.9 , HORVU6Hr1G092430.8 , HORVU6Hr1G092430.9 , HORVU6Hr1G092430.6 , HORVU1Hr1G037760.1 , HORVU6Hr1G092430.4 , HORVU6Hr1G092430.5 , HORVU6Hr1G092430.2 , HORVU6Hr1G092430.3 , HORVU1Hr1G037760.6 , HORVU6Hr1G092430.1 , HORVU1Hr1G037760.12 , HORVU1Hr1G037760.13 , HORVU1Hr1G037760.11 , HORVU1Hr1G037760.16 , HORVU4Hr1G086800.1 , HORVU4Hr1G086800.2 , HORVU4Hr1G086800.3 , HORVU6Hr1G092430.14 , HORVU6Hr1G092430.15 , HORVU6Hr1G092430.16 , HORVU6Hr1G092430.11 , HORVU6Hr1G092430.12 , HORVU6Hr1G092430.7 , HORVU6Hr1G092430.10 , HORVU1Hr1G037760.2 , HORVU1Hr1G037760.3 , HORVU1Hr1G037760.4 , HORVU1Hr1G053160.2 , HORVU1Hr1G053160.3 , HORVU1Hr1G053160.4 , HORVU1Hr1G053160.5 , HORVU1Hr1G037760.5 , HORVU1Hr1G037760.7 , HORVU4Hr1G079710.10 , HORVU6Hr1G092430.13
Wheat TraesCS1A02G142400 , TraesCS1D02G141400 , TraesCS4A02G412500 , TraesCS4D02G354900 , TraesCS1B02G221100 , TraesCS1A02G207300 , TraesCS6B02G444100 , TraesCS6B02G444100 , TraesCS5A02G529900 , TraesCS4B02G312600 , TraesCS1B02G159400 , TraesCS1D02G210500 , TraesCS6D02G385600 , TraesCS4D02G310100 , TraesCS6A02G402000 , TraesCS4B02G361900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G118801 - -
2 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
3 Sobic.010G087900 similar to Aquaporin PIP1-6(PubMedID : 29862293)@-(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.005G097400 cell death associated protein, putative, expressed -
5 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
7 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
8 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
9 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
10 Sobic.010G031700 thaumatin, putative, expressed -
11 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
12 Sobic.008G020000 - -
13 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
14 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
15 Sobic.001G348400 expressed protein -
16 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.010G191600 cytochrome P450, putative, expressed -
19 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -


Gene co-expression network
sample Sobic001G539200 Sobic001G539200 Sobic002G118801 Sobic002G118801 Sobic001G539200--Sobic002G118801 Sobic005G119900 Sobic005G119900 Sobic001G539200--Sobic005G119900 Sobic010G087900 Sobic010G087900 Sobic001G539200--Sobic010G087900 Sobic005G097400 Sobic005G097400 Sobic001G539200--Sobic005G097400 Sobic003G053200 Sobic003G053200 Sobic001G539200--Sobic003G053200 Sobic004G029400 Sobic004G029400 Sobic001G539200--Sobic004G029400 Sobic003G441800 Sobic003G441800 Sobic001G539200--Sobic003G441800 Sobic008G109400 Sobic008G109400 Sobic001G539200--Sobic008G109400 Sobic003G441700 Sobic003G441700 Sobic001G539200--Sobic003G441700 Sobic002G118801--Sobic001G539200 Sobic002G118801--Sobic005G097400 Sobic001G348400 Sobic001G348400 Sobic002G118801--Sobic001G348400 Sobic003G167300 Sobic003G167300 Sobic002G118801--Sobic003G167300 Sobic006G205700 Sobic006G205700 Sobic002G118801--Sobic006G205700 Sobic008G020000 Sobic008G020000 Sobic002G118801--Sobic008G020000 Sobic007G086300 Sobic007G086300 Sobic002G118801--Sobic007G086300 Sobic002G118801--Sobic003G053200 Sobic002G118801--Sobic003G441800 Sobic005G119900--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic005G119900--Sobic001G301000 Sobic001G181600 Sobic001G181600 Sobic005G119900--Sobic001G181600 Sobic004G121600 Sobic004G121600 Sobic005G119900--Sobic004G121600 Sobic005G119900--Sobic003G441800 Sobic005G119900--Sobic003G053200 Sobic003G154500 Sobic003G154500 Sobic005G119900--Sobic003G154500 Sobic009G055300 Sobic009G055300 Sobic005G119900--Sobic009G055300 Sobic001G231800 Sobic001G231800 Sobic005G119900--Sobic001G231800 Sobic010G087900--Sobic001G539200 Sobic003G206400 Sobic003G206400 Sobic010G087900--Sobic003G206400 Sobic010G087900--Sobic008G020000 Sobic010G087900--Sobic003G053200 Sobic002G063600 Sobic002G063600 Sobic010G087900--Sobic002G063600 Sobic003G317900 Sobic003G317900 Sobic010G087900--Sobic003G317900 Sobic003G095100 Sobic003G095100 Sobic010G087900--Sobic003G095100 Sobic010G087900--Sobic004G029400 Sobic010G031700 Sobic010G031700 Sobic010G087900--Sobic010G031700 Sobic010G191600 Sobic010G191600 Sobic005G097400--Sobic010G191600 Sobic005G097400--Sobic002G118801 Sobic005G097400--Sobic006G205700 Sobic005G097400--Sobic001G539200 Sobic004G106100 Sobic004G106100 Sobic005G097400--Sobic004G106100 Sobic001G414800 Sobic001G414800 Sobic005G097400--Sobic001G414800 Sobic002G391400 Sobic002G391400 Sobic005G097400--Sobic002G391400 Sobic005G097400--Sobic003G167300 Sobic005G097400--Sobic007G086300 Sobic003G053200--Sobic003G441800 Sobic003G053200--Sobic003G441700 Sobic003G053200--Sobic001G301000 Sobic003G053200--Sobic004G121600 Sobic003G053200--Sobic010G031700 Sobic003G053200--Sobic005G119900 Sobic003G053200--Sobic004G029400 Sobic003G053200--Sobic001G231800 Sobic007G037600 Sobic007G037600 Sobic003G053200--Sobic007G037600 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G029400--Sobic004G121600 Sobic004G029400--Sobic007G037600 Sobic004G029400--Sobic001G539200 Sobic009G181600 Sobic009G181600 Sobic004G029400--Sobic009G181600 Sobic003G282300 Sobic003G282300 Sobic004G029400--Sobic003G282300 Sobic004G029400--Sobic005G119900 Sobic003G441800--Sobic003G053200 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic003G441800--Sobic004G121600 Sobic003G441800--Sobic005G119900 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic001G153100 Sobic001G153100 Sobic008G109400--Sobic001G153100 Sobic001G415100 Sobic001G415100 Sobic008G109400--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic008G109400--Sobic002G289500 Sobic006G230200 Sobic006G230200 Sobic008G109400--Sobic006G230200 Sobic001G395900 Sobic001G395900 Sobic008G109400--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic008G109400--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic008G109400--Sobic004G299500 Sobic008G109400--Sobic009G055300 Sobic002G063700 Sobic002G063700 Sobic008G109400--Sobic002G063700 Sobic003G441700--Sobic005G119900 Sobic003G441700--Sobic003G053200 Sobic003G441700--Sobic003G441800 Sobic003G441700--Sobic004G121600 Sobic003G441700--Sobic001G301000 Sobic003G441700--Sobic009G055300 Sobic003G441700--Sobic001G181600 Sobic006G097900 Sobic006G097900 Sobic003G441700--Sobic006G097900 Sobic003G441700--Sobic001G231800
Octagon: transcription factors


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