Gene annotation
Transcriptome id Sobic.001G231800.1
Synonym Sb01g020320
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5WZI8
Pfam -
Panther DB PTHR33548 PTHR33548:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31640.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012779
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
2 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
6 Sobic.004G121600 expansin precursor, putative, expressed -
7 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.010G268700 expansin precursor, putative, expressed -
9 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
10 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
11 Sobic.004G121800 expansin precursor, putative, expressed -
12 Sobic.005G206000 dirigent, putative, expressed -
13 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
14 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
15 Sobic.005G060200 cytochrome P450, putative, expressed -
16 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
17 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
18 Sobic.004G346300 expressed protein -
19 Sobic.005G216600 plant protein of unknown function domain containing protein, expressed -
20 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic001G231800 Sobic001G231800 Sobic001G301000 Sobic001G301000 Sobic001G231800--Sobic001G301000 Sobic008G010500 Sobic008G010500 Sobic001G231800--Sobic008G010500 Sobic010G245400 Sobic010G245400 Sobic001G231800--Sobic010G245400 Sobic005G119900 Sobic005G119900 Sobic001G231800--Sobic005G119900 Sobic003G441700 Sobic003G441700 Sobic001G231800--Sobic003G441700 Sobic004G121600 Sobic004G121600 Sobic001G231800--Sobic004G121600 Sobic003G053200 Sobic003G053200 Sobic001G231800--Sobic003G053200 Sobic010G268700 Sobic010G268700 Sobic001G231800--Sobic010G268700 Sobic003G357700 Sobic003G357700 Sobic001G231800--Sobic003G357700 Sobic001G301000--Sobic001G231800 Sobic001G301000--Sobic008G010500 Sobic001G301000--Sobic004G121600 Sobic001G301000--Sobic003G441700 Sobic001G301000--Sobic005G119900 Sobic001G301000--Sobic003G053200 Sobic001G301000--Sobic010G268700 Sobic001G301000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic001G301000--Sobic006G097900 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic008G010500--Sobic005G119900 Sobic005G206000 Sobic005G206000 Sobic008G010500--Sobic005G206000 Sobic008G010500--Sobic003G441700 Sobic008G010500--Sobic010G245400 Sobic008G010500--Sobic003G053200 Sobic010G245400--Sobic001G231800 Sobic010G245400--Sobic001G301000 Sobic005G216400 Sobic005G216400 Sobic010G245400--Sobic005G216400 Sobic010G245400--Sobic010G268700 Sobic010G245400--Sobic005G119900 Sobic005G060200 Sobic005G060200 Sobic010G245400--Sobic005G060200 Sobic007G212000 Sobic007G212000 Sobic010G245400--Sobic007G212000 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500 Sobic005G119900--Sobic003G441700 Sobic005G119900--Sobic001G301000 Sobic001G181600 Sobic001G181600 Sobic005G119900--Sobic001G181600 Sobic005G119900--Sobic004G121600 Sobic003G441800 Sobic003G441800 Sobic005G119900--Sobic003G441800 Sobic005G119900--Sobic003G053200 Sobic003G154500 Sobic003G154500 Sobic005G119900--Sobic003G154500 Sobic009G055300 Sobic009G055300 Sobic005G119900--Sobic009G055300 Sobic005G119900--Sobic001G231800 Sobic003G441700--Sobic005G119900 Sobic003G441700--Sobic003G053200 Sobic003G441700--Sobic003G441800 Sobic003G441700--Sobic004G121600 Sobic003G441700--Sobic001G301000 Sobic003G441700--Sobic009G055300 Sobic003G441700--Sobic001G181600 Sobic003G441700--Sobic006G097900 Sobic003G441700--Sobic001G231800 Sobic004G121600--Sobic003G441700 Sobic004G121600--Sobic001G301000 Sobic004G121600--Sobic006G097900 Sobic004G121600--Sobic005G119900 Sobic004G121600--Sobic003G053200 Sobic004G121600--Sobic003G441800 Sobic004G121600--Sobic008G010500 Sobic001G218400 Sobic001G218400 Sobic004G121600--Sobic001G218400 Sobic004G121800 Sobic004G121800 Sobic004G121600--Sobic004G121800 Sobic003G053200--Sobic003G441800 Sobic003G053200--Sobic003G441700 Sobic003G053200--Sobic001G301000 Sobic003G053200--Sobic004G121600 Sobic010G031700 Sobic010G031700 Sobic003G053200--Sobic010G031700 Sobic003G053200--Sobic005G119900 Sobic004G029400 Sobic004G029400 Sobic003G053200--Sobic004G029400 Sobic003G053200--Sobic001G231800 Sobic007G037600 Sobic007G037600 Sobic003G053200--Sobic007G037600 Sobic010G268700--Sobic006G097900 Sobic010G268700--Sobic005G060200 Sobic010G268700--Sobic001G301000 Sobic005G216600 Sobic005G216600 Sobic010G268700--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic010G268700--Sobic001G293100 Sobic005G197500 Sobic005G197500 Sobic010G268700--Sobic005G197500 Sobic010G268700--Sobic008G010500 Sobic004G002901 Sobic004G002901 Sobic010G268700--Sobic004G002901 Sobic003G161400 Sobic003G161400 Sobic010G268700--Sobic003G161400 Sobic003G357700--Sobic005G216400 Sobic003G443700 Sobic003G443700 Sobic003G357700--Sobic003G443700 Sobic004G346300 Sobic004G346300 Sobic003G357700--Sobic004G346300 Sobic007G177400 Sobic007G177400 Sobic003G357700--Sobic007G177400 Sobic003G357700--Sobic005G119900 Sobic002G366200 Sobic002G366200 Sobic003G357700--Sobic002G366200 Sobic003G357700--Sobic007G212000 Sobic002G178101 Sobic002G178101 Sobic003G357700--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic003G357700--Sobic008G105800
Octagon: transcription factors


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