Gene annotation
Transcriptome id Sobic.005G206000.1
Synonym Sb05g026070
Functional annotation dirigent, putative, expressed
UniProt C5Y7G2
Pfam PF03018
Panther DB PTHR21495:SF81 PTHR21495
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42510 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os10g18760.1 : dirigent, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G206000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
2 Sobic.010G268700 expansin precursor, putative, expressed -
3 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
5 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
6 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
8 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
10 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.005G216600 plant protein of unknown function domain containing protein, expressed -
12 Sobic.004G121600 expansin precursor, putative, expressed -
13 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
14 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
15 Sobic.008G164450 - -
16 Sobic.004G346300 expressed protein -
17 Sobic.002G025500 expressed protein -
18 Sobic.007G186500 resistance protein, putative, expressed -
19 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G206000 Sobic005G206000 Sobic001G301000 Sobic001G301000 Sobic005G206000--Sobic001G301000 Sobic010G268700 Sobic010G268700 Sobic005G206000--Sobic010G268700 Sobic008G010500 Sobic008G010500 Sobic005G206000--Sobic008G010500 Sobic001G231800 Sobic001G231800 Sobic005G206000--Sobic001G231800 Sobic005G177100 Sobic005G177100 Sobic005G206000--Sobic005G177100 Sobic010G245400 Sobic010G245400 Sobic005G206000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic005G206000--Sobic006G097900 Sobic003G053600 Sobic003G053600 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901 Sobic001G301000--Sobic001G231800 Sobic001G301000--Sobic008G010500 Sobic004G121600 Sobic004G121600 Sobic001G301000--Sobic004G121600 Sobic003G441700 Sobic003G441700 Sobic001G301000--Sobic003G441700 Sobic005G119900 Sobic005G119900 Sobic001G301000--Sobic005G119900 Sobic003G053200 Sobic003G053200 Sobic001G301000--Sobic003G053200 Sobic001G301000--Sobic010G268700 Sobic001G301000--Sobic010G245400 Sobic001G301000--Sobic006G097900 Sobic010G268700--Sobic006G097900 Sobic005G060200 Sobic005G060200 Sobic010G268700--Sobic005G060200 Sobic010G268700--Sobic001G301000 Sobic005G216600 Sobic005G216600 Sobic010G268700--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic010G268700--Sobic001G293100 Sobic005G197500 Sobic005G197500 Sobic010G268700--Sobic005G197500 Sobic010G268700--Sobic008G010500 Sobic010G268700--Sobic004G002901 Sobic003G161400 Sobic003G161400 Sobic010G268700--Sobic003G161400 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic008G010500--Sobic005G119900 Sobic008G010500--Sobic005G206000 Sobic008G010500--Sobic003G441700 Sobic008G010500--Sobic010G245400 Sobic008G010500--Sobic003G053200 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic003G357700 Sobic003G357700 Sobic001G231800--Sobic003G357700 Sobic005G177100--Sobic005G206000 Sobic007G177400 Sobic007G177400 Sobic005G177100--Sobic007G177400 Sobic007G064500 Sobic007G064500 Sobic005G177100--Sobic007G064500 Sobic005G177100--Sobic008G010500 Sobic005G177100--Sobic001G231800 Sobic004G346300 Sobic004G346300 Sobic005G177100--Sobic004G346300 Sobic005G162400 Sobic005G162400 Sobic005G177100--Sobic005G162400 Sobic002G366200 Sobic002G366200 Sobic005G177100--Sobic002G366200 Sobic005G177100--Sobic010G245400 Sobic010G245400--Sobic001G231800 Sobic010G245400--Sobic001G301000 Sobic005G216400 Sobic005G216400 Sobic010G245400--Sobic005G216400 Sobic010G245400--Sobic010G268700 Sobic010G245400--Sobic005G119900 Sobic010G245400--Sobic005G060200 Sobic007G212000 Sobic007G212000 Sobic010G245400--Sobic007G212000 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500 Sobic006G097900--Sobic004G121600 Sobic006G097900--Sobic010G268700 Sobic006G097900--Sobic003G441700 Sobic001G181600 Sobic001G181600 Sobic006G097900--Sobic001G181600 Sobic001G218400 Sobic001G218400 Sobic006G097900--Sobic001G218400 Sobic006G097900--Sobic005G216600 Sobic006G097900--Sobic001G293100 Sobic003G441800 Sobic003G441800 Sobic006G097900--Sobic003G441800 Sobic006G097900--Sobic005G119900 Sobic003G353200 Sobic003G353200 Sobic003G053600--Sobic003G353200 Sobic005G063400 Sobic005G063400 Sobic003G053600--Sobic005G063400 Sobic006G174300 Sobic006G174300 Sobic003G053600--Sobic006G174300 Sobic010G031700 Sobic010G031700 Sobic003G053600--Sobic010G031700 Sobic006G277700 Sobic006G277700 Sobic003G053600--Sobic006G277700 Sobic002G146000 Sobic002G146000 Sobic003G053600--Sobic002G146000 Sobic007G057400 Sobic007G057400 Sobic003G053600--Sobic007G057400 Sobic003G053600--Sobic005G206000 Sobic008G164450 Sobic008G164450 Sobic003G053600--Sobic008G164450 Sobic004G002901--Sobic005G060200 Sobic004G002901--Sobic005G197500 Sobic004G002901--Sobic010G268700 Sobic004G002901--Sobic004G346300 Sobic001G271300 Sobic001G271300 Sobic004G002901--Sobic001G271300 Sobic007G111800 Sobic007G111800 Sobic004G002901--Sobic007G111800 Sobic004G002901--Sobic007G212000 Sobic004G002901--Sobic010G245400 Sobic003G443700 Sobic003G443700 Sobic004G002901--Sobic003G443700
Octagon: transcription factors


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