Gene annotation
Transcriptome id Sobic.004G002901.1,Sobic.004G002901.2
Synonym -
Functional annotation -
UniProt A0A1Z5RKQ4
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF54
NCBI CDD -
KEGG Orthology K02940; RP-L9e, large subunit ribosomal protein L9e
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G30340 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os06g01966.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a035089
Brachypodium KQJ92771 , KQJ92768
Barley HORVU6Hr1G000500.28 , HORVU6Hr1G000500.27 , HORVU6Hr1G000500.20 , HORVU6Hr1G000500.21 , HORVU6Hr1G000500.54 , HORVU6Hr1G000500.51 , HORVU6Hr1G000500.50 , HORVU6Hr1G000500.53 , HORVU6Hr1G000500.52 , HORVU6Hr1G000500.11 , HORVU6Hr1G000500.10 , HORVU6Hr1G000500.13 , HORVU6Hr1G000500.12 , HORVU6Hr1G000500.15 , HORVU6Hr1G000500.14 , HORVU6Hr1G000500.17 , HORVU6Hr1G000500.16 , HORVU6Hr1G000500.19 , HORVU6Hr1G000500.18 , HORVU6Hr1G000500.48 , HORVU6Hr1G000500.49 , HORVU6Hr1G000500.42 , HORVU6Hr1G000500.43 , HORVU6Hr1G000500.40 , HORVU6Hr1G000500.41 , HORVU6Hr1G000500.46 , HORVU6Hr1G000500.47 , HORVU6Hr1G000500.44 , HORVU6Hr1G000500.45 , HORVU6Hr1G000500.5 , HORVU6Hr1G000500.4 , HORVU6Hr1G000500.7 , HORVU6Hr1G000500.6 , HORVU6Hr1G000500.1 , HORVU6Hr1G000500.3 , HORVU6Hr1G000500.2 , HORVU6Hr1G000500.9 , HORVU6Hr1G000500.8 , HORVU6Hr1G000500.39 , HORVU6Hr1G000500.38 , HORVU6Hr1G000500.37 , HORVU6Hr1G000500.36 , HORVU6Hr1G000500.35 , HORVU6Hr1G000500.34 , HORVU6Hr1G000500.33 , HORVU6Hr1G000500.32 , HORVU6Hr1G000500.31 , HORVU6Hr1G000500.30 , HORVU6Hr1G000500.29 , HORVU6Hr1G000500.24 , HORVU6Hr1G000500.25 , HORVU6Hr1G000500.26 , HORVU6Hr1G000500.22 , HORVU6Hr1G000500.23
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G060200 cytochrome P450, putative, expressed -
2 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
3 Sobic.010G268700 expansin precursor, putative, expressed -
4 Sobic.004G346300 expressed protein -
5 Sobic.001G271300 expressed protein -
6 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
7 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
10 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
11 Sobic.004G228600 - -
12 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
14 Sobic.007G015000 methyltransferase domain containing protein, expressed -
15 Sobic.006G121000 purine permease, putative, expressed -
16 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
18 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
20 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -


Gene co-expression network
sample Sobic004G002901 Sobic004G002901 Sobic005G060200 Sobic005G060200 Sobic004G002901--Sobic005G060200 Sobic005G197500 Sobic005G197500 Sobic004G002901--Sobic005G197500 Sobic010G268700 Sobic010G268700 Sobic004G002901--Sobic010G268700 Sobic004G346300 Sobic004G346300 Sobic004G002901--Sobic004G346300 Sobic001G271300 Sobic001G271300 Sobic004G002901--Sobic001G271300 Sobic007G111800 Sobic007G111800 Sobic004G002901--Sobic007G111800 Sobic007G212000 Sobic007G212000 Sobic004G002901--Sobic007G212000 Sobic010G245400 Sobic010G245400 Sobic004G002901--Sobic010G245400 Sobic003G443700 Sobic003G443700 Sobic004G002901--Sobic003G443700 Sobic005G060200--Sobic010G268700 Sobic005G216400 Sobic005G216400 Sobic005G060200--Sobic005G216400 Sobic005G060200--Sobic004G002901 Sobic006G121000 Sobic006G121000 Sobic005G060200--Sobic006G121000 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic002G178101 Sobic002G178101 Sobic005G060200--Sobic002G178101 Sobic007G015000 Sobic007G015000 Sobic005G060200--Sobic007G015000 Sobic005G197400 Sobic005G197400 Sobic005G197500--Sobic005G197400 Sobic004G009200 Sobic004G009200 Sobic005G197500--Sobic004G009200 Sobic005G197500--Sobic005G060200 Sobic005G197500--Sobic004G002901 Sobic005G197500--Sobic010G268700 Sobic005G182900 Sobic005G182900 Sobic005G197500--Sobic005G182900 Sobic005G197500--Sobic001G271300 Sobic010G242800 Sobic010G242800 Sobic005G197500--Sobic010G242800 Sobic008G033100 Sobic008G033100 Sobic005G197500--Sobic008G033100 Sobic006G097900 Sobic006G097900 Sobic010G268700--Sobic006G097900 Sobic010G268700--Sobic005G060200 Sobic001G301000 Sobic001G301000 Sobic010G268700--Sobic001G301000 Sobic005G216600 Sobic005G216600 Sobic010G268700--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic010G268700--Sobic001G293100 Sobic010G268700--Sobic005G197500 Sobic008G010500 Sobic008G010500 Sobic010G268700--Sobic008G010500 Sobic010G268700--Sobic004G002901 Sobic003G161400 Sobic003G161400 Sobic010G268700--Sobic003G161400 Sobic004G346300--Sobic003G443700 Sobic003G357700 Sobic003G357700 Sobic004G346300--Sobic003G357700 Sobic004G346300--Sobic005G216400 Sobic004G346300--Sobic005G060200 Sobic007G177400 Sobic007G177400 Sobic004G346300--Sobic007G177400 Sobic004G346300--Sobic004G002901 Sobic004G346300--Sobic007G212000 Sobic003G023600 Sobic003G023600 Sobic004G346300--Sobic003G023600 Sobic002G025500 Sobic002G025500 Sobic004G346300--Sobic002G025500 Sobic001G271300--Sobic005G197500 Sobic001G271300--Sobic010G268700 Sobic001G271300--Sobic007G111800 Sobic001G415100 Sobic001G415100 Sobic001G271300--Sobic001G415100 Sobic005G097900 Sobic005G097900 Sobic001G271300--Sobic005G097900 Sobic001G271300--Sobic001G293100 Sobic001G271300--Sobic005G060200 Sobic001G271300--Sobic007G212000 Sobic001G271300--Sobic004G009200 Sobic007G111800--Sobic006G097900 Sobic007G111800--Sobic007G015000 Sobic007G111800--Sobic010G268700 Sobic007G111800--Sobic001G271300 Sobic007G111800--Sobic007G212000 Sobic007G111800--Sobic001G293100 Sobic005G106300 Sobic005G106300 Sobic007G111800--Sobic005G106300 Sobic010G152500 Sobic010G152500 Sobic007G111800--Sobic010G152500 Sobic003G083800 Sobic003G083800 Sobic007G111800--Sobic003G083800 Sobic007G212000--Sobic007G015000 Sobic006G230100 Sobic006G230100 Sobic007G212000--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic007G212000--Sobic008G105800 Sobic007G212000--Sobic005G216400 Sobic007G212000--Sobic006G121000 Sobic007G202480 Sobic007G202480 Sobic007G212000--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic007G212000--Sobic004G299500 Sobic007G212000--Sobic005G060200 Sobic001G181600 Sobic001G181600 Sobic007G212000--Sobic001G181600 Sobic001G231800 Sobic001G231800 Sobic010G245400--Sobic001G231800 Sobic010G245400--Sobic001G301000 Sobic010G245400--Sobic005G216400 Sobic010G245400--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic010G245400--Sobic005G119900 Sobic010G245400--Sobic005G060200 Sobic010G245400--Sobic007G212000 Sobic010G245400--Sobic003G357700 Sobic010G245400--Sobic008G010500 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic003G443700--Sobic002G178101 Sobic003G443700--Sobic005G060200 Sobic003G443700--Sobic002G025500 Sobic003G443700--Sobic007G177400 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632
Octagon: transcription factors


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