Gene annotation
Transcriptome id Sobic.003G443700.1
Synonym ZIP2, Sb03g047340
Functional annotation metal cation transporter, putative, expressed
UniProt C5XJE0
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF23
NCBI CDD KOG1558; Fe2+/Zn2+ regulated transporter
KEGG Orthology K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G59520 : ZRT/IRT-like protein 2
RAP-DB (Rice) LOC_Os01g74110.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G114990.1 , HORVU6Hr1G018070.8 , HORVU6Hr1G018070.9 , HORVU6Hr1G018070.1 , HORVU6Hr1G018070.2 , HORVU6Hr1G018070.3 , HORVU6Hr1G018070.4 , HORVU6Hr1G018070.5 , HORVU6Hr1G018070.6 , HORVU6Hr1G018070.7 , HORVU6Hr1G018070.12 , HORVU6Hr1G018070.10 , HORVU6Hr1G018070.11 , HORVU3Hr1G114990.5 , HORVU3Hr1G114990.4 , HORVU3Hr1G114990.6 , HORVU3Hr1G114990.3 , HORVU3Hr1G114990.2
Wheat TraesCS6A02G099800 , TraesCS6A02G099800 , TraesCS6D02G082600 , TraesCS3B02G595100 , TraesCS3A02G527000 , TraesCS6B02G128000 , TraesCS6B02G128000 , TraesCS3D02G532400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.004G346300 expressed protein -
3 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
4 Sobic.002G178101 - -
5 Sobic.005G060200 cytochrome P450, putative, expressed -
6 Sobic.002G025500 expressed protein -
7 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
8 Sobic.006G121000 purine permease, putative, expressed -
9 Sobic.002G028632 - -
10 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
13 Sobic.002G366200 NAD dependent epimerase/dehydratase family protein, putative, expressed -
14 Sobic.002G178200 - -
15 Sobic.010G268700 expansin precursor, putative, expressed -
16 Sobic.008G105800 cytochrome P450, putative, expressed -
17 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
18 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
19 Sobic.001G378500 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.007G015000 methyltransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G443700 Sobic003G443700 Sobic003G357700 Sobic003G357700 Sobic003G443700--Sobic003G357700 Sobic004G346300 Sobic004G346300 Sobic003G443700--Sobic004G346300 Sobic005G216400 Sobic005G216400 Sobic003G443700--Sobic005G216400 Sobic002G178101 Sobic002G178101 Sobic003G443700--Sobic002G178101 Sobic005G060200 Sobic005G060200 Sobic003G443700--Sobic005G060200 Sobic002G025500 Sobic002G025500 Sobic003G443700--Sobic002G025500 Sobic007G177400 Sobic007G177400 Sobic003G443700--Sobic007G177400 Sobic006G121000 Sobic006G121000 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic003G357700--Sobic007G177400 Sobic005G119900 Sobic005G119900 Sobic003G357700--Sobic005G119900 Sobic002G366200 Sobic002G366200 Sobic003G357700--Sobic002G366200 Sobic007G212000 Sobic007G212000 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic003G357700--Sobic008G105800 Sobic004G346300--Sobic003G443700 Sobic004G346300--Sobic003G357700 Sobic004G346300--Sobic005G216400 Sobic004G346300--Sobic005G060200 Sobic004G346300--Sobic007G177400 Sobic004G002901 Sobic004G002901 Sobic004G346300--Sobic004G002901 Sobic004G346300--Sobic007G212000 Sobic003G023600 Sobic003G023600 Sobic004G346300--Sobic003G023600 Sobic004G346300--Sobic002G025500 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic002G178200 Sobic002G178200 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic005G220300 Sobic005G220300 Sobic002G178101--Sobic005G220300 Sobic002G178101--Sobic005G216400 Sobic002G178101--Sobic006G121000 Sobic002G178101--Sobic002G178200 Sobic002G178101--Sobic003G443700 Sobic002G178101--Sobic005G060200 Sobic002G178101--Sobic003G357700 Sobic002G178000 Sobic002G178000 Sobic002G178101--Sobic002G178000 Sobic005G162400 Sobic005G162400 Sobic002G178101--Sobic005G162400 Sobic010G268700 Sobic010G268700 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G197500 Sobic005G197500 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic007G015000 Sobic007G015000 Sobic005G060200--Sobic007G015000 Sobic002G025500--Sobic003G443700 Sobic002G025500--Sobic004G346300 Sobic002G025500--Sobic003G357700 Sobic002G025500--Sobic010G268700 Sobic002G025500--Sobic002G366200 Sobic002G025500--Sobic005G060200 Sobic002G025500--Sobic005G216400 Sobic002G025500--Sobic007G177400 Sobic007G111800 Sobic007G111800 Sobic002G025500--Sobic007G111800 Sobic007G177400--Sobic003G357700 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic007G177400--Sobic003G443700 Sobic007G064500 Sobic007G064500 Sobic007G177400--Sobic007G064500 Sobic007G177400--Sobic002G028632 Sobic007G177400--Sobic005G216400 Sobic007G177400--Sobic003G023600 Sobic007G177400--Sobic002G025500 Sobic006G121000--Sobic002G178200 Sobic006G121000--Sobic008G105800 Sobic006G121000--Sobic005G216400 Sobic004G299500 Sobic004G299500 Sobic006G121000--Sobic004G299500 Sobic006G121000--Sobic007G015000 Sobic006G121000--Sobic007G212000 Sobic005G069166 Sobic005G069166 Sobic006G121000--Sobic005G069166 Sobic006G121000--Sobic002G178101 Sobic005G069332 Sobic005G069332 Sobic006G121000--Sobic005G069332 Sobic002G028632--Sobic002G366200 Sobic002G028632--Sobic003G357700 Sobic002G028632--Sobic003G443700 Sobic002G028632--Sobic007G177400 Sobic002G028632--Sobic005G216400 Sobic002G028632--Sobic004G346300 Sobic002G028632--Sobic002G025500 Sobic002G028632--Sobic007G064500 Sobic002G028632--Sobic002G178101
Octagon: transcription factors


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