Gene annotation
Transcriptome id Sobic.002G178200.1
Synonym
Functional annotation -
UniProt A0A1B6QC23
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121000 purine permease, putative, expressed -
2 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
3 Sobic.002G178101 - -
4 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
5 Sobic.006G229901 - -
6 Sobic.007G202480 - -
7 Sobic.008G105800 cytochrome P450, putative, expressed -
8 Sobic.004G299500 - -
9 Sobic.005G069166 - -
10 Sobic.005G060200 cytochrome P450, putative, expressed -
11 Sobic.005G069332 - -
12 Sobic.007G015000 methyltransferase domain containing protein, expressed -
13 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.003G045650 - -
15 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
16 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
18 Sobic.003G317300 "a rapidly evolving gene family, termed Rp1/Pi37, which had an effector response that confers resistance to multiple pathogens across species."(PubMedID : 25928459)@rp1, putative, expressed -
19 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity


Gene co-expression network
sample Sobic002G178200 Sobic002G178200 Sobic006G121000 Sobic006G121000 Sobic002G178200--Sobic006G121000 Sobic005G216400 Sobic005G216400 Sobic002G178200--Sobic005G216400 Sobic002G178101 Sobic002G178101 Sobic002G178200--Sobic002G178101 Sobic007G212000 Sobic007G212000 Sobic002G178200--Sobic007G212000 Sobic006G229901 Sobic006G229901 Sobic002G178200--Sobic006G229901 Sobic007G202480 Sobic007G202480 Sobic002G178200--Sobic007G202480 Sobic008G105800 Sobic008G105800 Sobic002G178200--Sobic008G105800 Sobic004G299500 Sobic004G299500 Sobic002G178200--Sobic004G299500 Sobic005G069166 Sobic005G069166 Sobic002G178200--Sobic005G069166 Sobic006G121000--Sobic002G178200 Sobic006G121000--Sobic008G105800 Sobic006G121000--Sobic005G216400 Sobic006G121000--Sobic004G299500 Sobic007G015000 Sobic007G015000 Sobic006G121000--Sobic007G015000 Sobic006G121000--Sobic007G212000 Sobic006G121000--Sobic005G069166 Sobic006G121000--Sobic002G178101 Sobic005G069332 Sobic005G069332 Sobic006G121000--Sobic005G069332 Sobic003G357700 Sobic003G357700 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G060200 Sobic005G060200 Sobic005G216400--Sobic005G060200 Sobic003G443700 Sobic003G443700 Sobic005G216400--Sobic003G443700 Sobic005G216400--Sobic002G178200 Sobic004G346300 Sobic004G346300 Sobic005G216400--Sobic004G346300 Sobic005G220300 Sobic005G220300 Sobic002G178101--Sobic005G220300 Sobic002G178101--Sobic005G216400 Sobic002G178101--Sobic006G121000 Sobic002G178101--Sobic002G178200 Sobic002G178101--Sobic003G443700 Sobic002G178101--Sobic005G060200 Sobic002G178101--Sobic003G357700 Sobic002G178000 Sobic002G178000 Sobic002G178101--Sobic002G178000 Sobic005G162400 Sobic005G162400 Sobic002G178101--Sobic005G162400 Sobic007G212000--Sobic007G015000 Sobic006G230100 Sobic006G230100 Sobic007G212000--Sobic006G230100 Sobic007G212000--Sobic008G105800 Sobic007G212000--Sobic005G216400 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic007G212000--Sobic005G060200 Sobic001G181600 Sobic001G181600 Sobic007G212000--Sobic001G181600 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic003G045650 Sobic003G045650 Sobic006G229901--Sobic003G045650 Sobic001G395900 Sobic001G395900 Sobic006G229901--Sobic001G395900 Sobic006G229901--Sobic006G230100 Sobic001G153100 Sobic001G153100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic008G058600 Sobic008G058600 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332 Sobic007G202480--Sobic001G395900 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic007G202480--Sobic001G153100 Sobic006G230200 Sobic006G230200 Sobic007G202480--Sobic006G230200 Sobic007G202480--Sobic005G069332 Sobic007G202480--Sobic008G105800 Sobic009G055300 Sobic009G055300 Sobic008G105800--Sobic009G055300 Sobic008G105800--Sobic005G069332 Sobic008G105800--Sobic005G069166 Sobic008G105800--Sobic007G202480 Sobic008G105800--Sobic006G230100 Sobic008G105800--Sobic005G216400 Sobic008G105800--Sobic006G121000 Sobic008G105800--Sobic004G299500 Sobic008G105800--Sobic006G230200 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic004G299500--Sobic008G058600 Sobic005G069166--Sobic004G299500 Sobic005G069166--Sobic005G069332 Sobic005G069166--Sobic006G230100 Sobic005G069166--Sobic007G202480 Sobic005G069166--Sobic001G153100 Sobic005G069166--Sobic006G229901 Sobic005G069166--Sobic008G105800 Sobic005G069166--Sobic001G395900 Sobic005G069166--Sobic007G015000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.