Gene annotation
Transcriptome id Sobic.005G216400.1
Synonym
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt A0A1Z5RJS2
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50160 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os11g17720.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033679 , Zm00025a021559
Brachypodium KQJ81824
Barley HORVU1Hr1G055270.1 , HORVU1Hr1G001690.1 , HORVU1Hr1G001610.1 , HORVU1Hr1G001610.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.002G178101 - -
3 Sobic.008G105800 cytochrome P450, putative, expressed -
4 Sobic.006G121000 purine permease, putative, expressed -
5 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
6 Sobic.005G060200 cytochrome P450, putative, expressed -
7 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
8 Sobic.002G178200 - -
9 Sobic.004G346300 expressed protein -
10 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.007G015000 methyltransferase domain containing protein, expressed -
12 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
13 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
14 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.010G268700 expansin precursor, putative, expressed -
16 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
18 Sobic.007G202480 - -
19 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
20 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic005G216400 Sobic005G216400 Sobic003G357700 Sobic003G357700 Sobic005G216400--Sobic003G357700 Sobic002G178101 Sobic002G178101 Sobic005G216400--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic005G216400--Sobic008G105800 Sobic006G121000 Sobic006G121000 Sobic005G216400--Sobic006G121000 Sobic007G212000 Sobic007G212000 Sobic005G216400--Sobic007G212000 Sobic005G060200 Sobic005G060200 Sobic005G216400--Sobic005G060200 Sobic003G443700 Sobic003G443700 Sobic005G216400--Sobic003G443700 Sobic002G178200 Sobic002G178200 Sobic005G216400--Sobic002G178200 Sobic004G346300 Sobic004G346300 Sobic005G216400--Sobic004G346300 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic007G177400 Sobic007G177400 Sobic003G357700--Sobic007G177400 Sobic005G119900 Sobic005G119900 Sobic003G357700--Sobic005G119900 Sobic002G366200 Sobic002G366200 Sobic003G357700--Sobic002G366200 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic003G357700--Sobic008G105800 Sobic005G220300 Sobic005G220300 Sobic002G178101--Sobic005G220300 Sobic002G178101--Sobic005G216400 Sobic002G178101--Sobic006G121000 Sobic002G178101--Sobic002G178200 Sobic002G178101--Sobic003G443700 Sobic002G178101--Sobic005G060200 Sobic002G178101--Sobic003G357700 Sobic002G178000 Sobic002G178000 Sobic002G178101--Sobic002G178000 Sobic005G162400 Sobic005G162400 Sobic002G178101--Sobic005G162400 Sobic009G055300 Sobic009G055300 Sobic008G105800--Sobic009G055300 Sobic005G069332 Sobic005G069332 Sobic008G105800--Sobic005G069332 Sobic005G069166 Sobic005G069166 Sobic008G105800--Sobic005G069166 Sobic007G202480 Sobic007G202480 Sobic008G105800--Sobic007G202480 Sobic006G230100 Sobic006G230100 Sobic008G105800--Sobic006G230100 Sobic008G105800--Sobic005G216400 Sobic008G105800--Sobic006G121000 Sobic004G299500 Sobic004G299500 Sobic008G105800--Sobic004G299500 Sobic006G230200 Sobic006G230200 Sobic008G105800--Sobic006G230200 Sobic006G121000--Sobic002G178200 Sobic006G121000--Sobic008G105800 Sobic006G121000--Sobic005G216400 Sobic006G121000--Sobic004G299500 Sobic007G015000 Sobic007G015000 Sobic006G121000--Sobic007G015000 Sobic006G121000--Sobic007G212000 Sobic006G121000--Sobic005G069166 Sobic006G121000--Sobic002G178101 Sobic006G121000--Sobic005G069332 Sobic007G212000--Sobic007G015000 Sobic007G212000--Sobic006G230100 Sobic007G212000--Sobic008G105800 Sobic007G212000--Sobic005G216400 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic007G212000--Sobic005G060200 Sobic001G181600 Sobic001G181600 Sobic007G212000--Sobic001G181600 Sobic010G268700 Sobic010G268700 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic004G002901 Sobic004G002901 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G197500 Sobic005G197500 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic005G060200--Sobic007G015000 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic003G443700--Sobic002G178101 Sobic003G443700--Sobic005G060200 Sobic002G025500 Sobic002G025500 Sobic003G443700--Sobic002G025500 Sobic003G443700--Sobic007G177400 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632 Sobic002G178200--Sobic006G121000 Sobic002G178200--Sobic005G216400 Sobic002G178200--Sobic002G178101 Sobic002G178200--Sobic007G212000 Sobic006G229901 Sobic006G229901 Sobic002G178200--Sobic006G229901 Sobic002G178200--Sobic007G202480 Sobic002G178200--Sobic008G105800 Sobic002G178200--Sobic004G299500 Sobic002G178200--Sobic005G069166 Sobic004G346300--Sobic003G443700 Sobic004G346300--Sobic003G357700 Sobic004G346300--Sobic005G216400 Sobic004G346300--Sobic005G060200 Sobic004G346300--Sobic007G177400 Sobic004G346300--Sobic004G002901 Sobic004G346300--Sobic007G212000 Sobic003G023600 Sobic003G023600 Sobic004G346300--Sobic003G023600 Sobic004G346300--Sobic002G025500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.