Gene annotation
Transcriptome id Sobic.004G346300.2,Sobic.004G346300.1,Sobic.004G346300.3
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RR93 , A0A194YT62 , A0A1Z5RQE6
Pfam -
Panther DB -
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g57350.1 : expressed protein
MaizeGDB (Corn) Zm00025a022615
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
2 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
4 Sobic.005G060200 cytochrome P450, putative, expressed -
5 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
6 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
7 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
9 Sobic.002G025500 expressed protein -
10 Sobic.010G268700 expansin precursor, putative, expressed -
11 Sobic.002G178101 - -
12 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
14 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
17 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.002G028632 - -
19 Sobic.002G366200 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic004G346300 Sobic004G346300 Sobic003G443700 Sobic003G443700 Sobic004G346300--Sobic003G443700 Sobic003G357700 Sobic003G357700 Sobic004G346300--Sobic003G357700 Sobic005G216400 Sobic005G216400 Sobic004G346300--Sobic005G216400 Sobic005G060200 Sobic005G060200 Sobic004G346300--Sobic005G060200 Sobic007G177400 Sobic007G177400 Sobic004G346300--Sobic007G177400 Sobic004G002901 Sobic004G002901 Sobic004G346300--Sobic004G002901 Sobic007G212000 Sobic007G212000 Sobic004G346300--Sobic007G212000 Sobic003G023600 Sobic003G023600 Sobic004G346300--Sobic003G023600 Sobic002G025500 Sobic002G025500 Sobic004G346300--Sobic002G025500 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic002G178101 Sobic002G178101 Sobic003G443700--Sobic002G178101 Sobic003G443700--Sobic005G060200 Sobic003G443700--Sobic002G025500 Sobic003G443700--Sobic007G177400 Sobic006G121000 Sobic006G121000 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic003G357700--Sobic007G177400 Sobic005G119900 Sobic005G119900 Sobic003G357700--Sobic005G119900 Sobic002G366200 Sobic002G366200 Sobic003G357700--Sobic002G366200 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic003G357700--Sobic008G105800 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic002G178200 Sobic002G178200 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic010G268700 Sobic010G268700 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G197500 Sobic005G197500 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic007G015000 Sobic007G015000 Sobic005G060200--Sobic007G015000 Sobic007G177400--Sobic003G357700 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic007G177400--Sobic003G443700 Sobic007G064500 Sobic007G064500 Sobic007G177400--Sobic007G064500 Sobic007G177400--Sobic002G028632 Sobic007G177400--Sobic005G216400 Sobic007G177400--Sobic003G023600 Sobic007G177400--Sobic002G025500 Sobic004G002901--Sobic005G060200 Sobic004G002901--Sobic005G197500 Sobic004G002901--Sobic010G268700 Sobic004G002901--Sobic004G346300 Sobic001G271300 Sobic001G271300 Sobic004G002901--Sobic001G271300 Sobic007G111800 Sobic007G111800 Sobic004G002901--Sobic007G111800 Sobic004G002901--Sobic007G212000 Sobic010G245400 Sobic010G245400 Sobic004G002901--Sobic010G245400 Sobic004G002901--Sobic003G443700 Sobic007G212000--Sobic007G015000 Sobic006G230100 Sobic006G230100 Sobic007G212000--Sobic006G230100 Sobic007G212000--Sobic008G105800 Sobic007G212000--Sobic005G216400 Sobic007G212000--Sobic006G121000 Sobic007G202480 Sobic007G202480 Sobic007G212000--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic007G212000--Sobic004G299500 Sobic007G212000--Sobic005G060200 Sobic001G181600 Sobic001G181600 Sobic007G212000--Sobic001G181600 Sobic003G023600--Sobic004G346300 Sobic003G023600--Sobic007G212000 Sobic003G023600--Sobic007G177400 Sobic003G023600--Sobic004G002901 Sobic003G023600--Sobic001G181600 Sobic003G023600--Sobic007G111800 Sobic003G154500 Sobic003G154500 Sobic003G023600--Sobic003G154500 Sobic003G023600--Sobic003G357700 Sobic005G105700 Sobic005G105700 Sobic003G023600--Sobic005G105700 Sobic002G025500--Sobic003G443700 Sobic002G025500--Sobic004G346300 Sobic002G025500--Sobic003G357700 Sobic002G025500--Sobic010G268700 Sobic002G025500--Sobic002G366200 Sobic002G025500--Sobic005G060200 Sobic002G025500--Sobic005G216400 Sobic002G025500--Sobic007G177400 Sobic002G025500--Sobic007G111800
Octagon: transcription factors


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