Gene annotation
Transcriptome id Sobic.002G366200.3,Sobic.002G366200.2
Synonym Sb02g038530
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt C5XDT9
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF458
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT4G27250 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os07g40986.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049770 , Zm00025a048682
Brachypodium -
Barley HORVU7Hr1G113350.2 , HORVU7Hr1G113350.3 , HORVU7Hr1G113350.1 , HORVU7Hr1G113350.6 , HORVU7Hr1G113350.5 , HORVU4Hr1G089470.1 , HORVU4Hr1G089470.2
Wheat TraesCS2B02G204600 , TraesCS2B02G204600 , TraesCS2B02G204600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G028632 - -
2 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
4 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
5 Sobic.002G025500 expressed protein -
6 Sobic.007G064500 peptide transporter PTR2, putative, expressed -
7 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
9 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
10 Sobic.004G346300 expressed protein -
11 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
12 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
14 Sobic.001G014700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.004G121600 expansin precursor, putative, expressed -
16 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
18 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
19 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
20 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -


Gene co-expression network
sample Sobic002G366200 Sobic002G366200 Sobic002G028632 Sobic002G028632 Sobic002G366200--Sobic002G028632 Sobic003G357700 Sobic003G357700 Sobic002G366200--Sobic003G357700 Sobic007G177400 Sobic007G177400 Sobic002G366200--Sobic007G177400 Sobic003G443700 Sobic003G443700 Sobic002G366200--Sobic003G443700 Sobic002G025500 Sobic002G025500 Sobic002G366200--Sobic002G025500 Sobic007G064500 Sobic007G064500 Sobic002G366200--Sobic007G064500 Sobic008G010500 Sobic008G010500 Sobic002G366200--Sobic008G010500 Sobic005G216400 Sobic005G216400 Sobic002G366200--Sobic005G216400 Sobic005G119900 Sobic005G119900 Sobic002G366200--Sobic005G119900 Sobic002G028632--Sobic002G366200 Sobic002G028632--Sobic003G357700 Sobic002G028632--Sobic003G443700 Sobic002G028632--Sobic007G177400 Sobic002G028632--Sobic005G216400 Sobic004G346300 Sobic004G346300 Sobic002G028632--Sobic004G346300 Sobic002G028632--Sobic002G025500 Sobic002G028632--Sobic007G064500 Sobic002G178101 Sobic002G178101 Sobic002G028632--Sobic002G178101 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic003G357700--Sobic007G177400 Sobic003G357700--Sobic005G119900 Sobic003G357700--Sobic002G366200 Sobic007G212000 Sobic007G212000 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic003G357700--Sobic008G105800 Sobic007G177400--Sobic003G357700 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic007G177400--Sobic003G443700 Sobic007G177400--Sobic007G064500 Sobic007G177400--Sobic002G028632 Sobic007G177400--Sobic005G216400 Sobic003G023600 Sobic003G023600 Sobic007G177400--Sobic003G023600 Sobic007G177400--Sobic002G025500 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic003G443700--Sobic002G178101 Sobic005G060200 Sobic005G060200 Sobic003G443700--Sobic005G060200 Sobic003G443700--Sobic002G025500 Sobic003G443700--Sobic007G177400 Sobic006G121000 Sobic006G121000 Sobic003G443700--Sobic006G121000 Sobic003G443700--Sobic002G028632 Sobic002G025500--Sobic003G443700 Sobic002G025500--Sobic004G346300 Sobic002G025500--Sobic003G357700 Sobic010G268700 Sobic010G268700 Sobic002G025500--Sobic010G268700 Sobic002G025500--Sobic002G366200 Sobic002G025500--Sobic005G060200 Sobic002G025500--Sobic005G216400 Sobic002G025500--Sobic007G177400 Sobic007G111800 Sobic007G111800 Sobic002G025500--Sobic007G111800 Sobic007G064500--Sobic007G177400 Sobic007G064500--Sobic002G366200 Sobic007G064500--Sobic002G028632 Sobic005G177100 Sobic005G177100 Sobic007G064500--Sobic005G177100 Sobic007G064500--Sobic002G025500 Sobic007G064500--Sobic003G443700 Sobic001G378500 Sobic001G378500 Sobic007G064500--Sobic001G378500 Sobic007G064500--Sobic004G346300 Sobic007G064500--Sobic003G357700 Sobic001G301000 Sobic001G301000 Sobic008G010500--Sobic001G301000 Sobic001G231800 Sobic001G231800 Sobic008G010500--Sobic001G231800 Sobic004G121600 Sobic004G121600 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic008G010500--Sobic005G119900 Sobic005G206000 Sobic005G206000 Sobic008G010500--Sobic005G206000 Sobic003G441700 Sobic003G441700 Sobic008G010500--Sobic003G441700 Sobic010G245400 Sobic010G245400 Sobic008G010500--Sobic010G245400 Sobic003G053200 Sobic003G053200 Sobic008G010500--Sobic003G053200 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic002G178200 Sobic002G178200 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic005G119900--Sobic003G441700 Sobic005G119900--Sobic001G301000 Sobic001G181600 Sobic001G181600 Sobic005G119900--Sobic001G181600 Sobic005G119900--Sobic004G121600 Sobic003G441800 Sobic003G441800 Sobic005G119900--Sobic003G441800 Sobic005G119900--Sobic003G053200 Sobic003G154500 Sobic003G154500 Sobic005G119900--Sobic003G154500 Sobic009G055300 Sobic009G055300 Sobic005G119900--Sobic009G055300 Sobic005G119900--Sobic001G231800
Octagon: transcription factors


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