Gene annotation
Transcriptome id Sobic.002G025500.1
Synonym Sb02g002320
Functional annotation expressed protein
UniProt A0A1W0W1X4
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45480 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os01g24240.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
2 Sobic.004G346300 expressed protein -
3 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.010G268700 expansin precursor, putative, expressed -
5 Sobic.002G366200 NAD dependent epimerase/dehydratase family protein, putative, expressed -
6 Sobic.005G060200 cytochrome P450, putative, expressed -
7 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
8 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
9 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
10 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
12 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
13 Sobic.002G028632 - -
14 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
15 Sobic.007G015000 methyltransferase domain containing protein, expressed -
16 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
18 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
19 Sobic.001G378500 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.007G186500 resistance protein, putative, expressed -


Gene co-expression network
sample Sobic002G025500 Sobic002G025500 Sobic003G443700 Sobic003G443700 Sobic002G025500--Sobic003G443700 Sobic004G346300 Sobic004G346300 Sobic002G025500--Sobic004G346300 Sobic003G357700 Sobic003G357700 Sobic002G025500--Sobic003G357700 Sobic010G268700 Sobic010G268700 Sobic002G025500--Sobic010G268700 Sobic002G366200 Sobic002G366200 Sobic002G025500--Sobic002G366200 Sobic005G060200 Sobic005G060200 Sobic002G025500--Sobic005G060200 Sobic005G216400 Sobic005G216400 Sobic002G025500--Sobic005G216400 Sobic007G177400 Sobic007G177400 Sobic002G025500--Sobic007G177400 Sobic007G111800 Sobic007G111800 Sobic002G025500--Sobic007G111800 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic002G178101 Sobic002G178101 Sobic003G443700--Sobic002G178101 Sobic003G443700--Sobic005G060200 Sobic003G443700--Sobic002G025500 Sobic003G443700--Sobic007G177400 Sobic006G121000 Sobic006G121000 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632 Sobic004G346300--Sobic003G443700 Sobic004G346300--Sobic003G357700 Sobic004G346300--Sobic005G216400 Sobic004G346300--Sobic005G060200 Sobic004G346300--Sobic007G177400 Sobic004G002901 Sobic004G002901 Sobic004G346300--Sobic004G002901 Sobic007G212000 Sobic007G212000 Sobic004G346300--Sobic007G212000 Sobic003G023600 Sobic003G023600 Sobic004G346300--Sobic003G023600 Sobic004G346300--Sobic002G025500 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic003G357700--Sobic007G177400 Sobic005G119900 Sobic005G119900 Sobic003G357700--Sobic005G119900 Sobic003G357700--Sobic002G366200 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic003G357700--Sobic008G105800 Sobic006G097900 Sobic006G097900 Sobic010G268700--Sobic006G097900 Sobic010G268700--Sobic005G060200 Sobic001G301000 Sobic001G301000 Sobic010G268700--Sobic001G301000 Sobic005G216600 Sobic005G216600 Sobic010G268700--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic010G268700--Sobic001G293100 Sobic005G197500 Sobic005G197500 Sobic010G268700--Sobic005G197500 Sobic008G010500 Sobic008G010500 Sobic010G268700--Sobic008G010500 Sobic010G268700--Sobic004G002901 Sobic003G161400 Sobic003G161400 Sobic010G268700--Sobic003G161400 Sobic002G366200--Sobic002G028632 Sobic002G366200--Sobic003G357700 Sobic002G366200--Sobic007G177400 Sobic002G366200--Sobic003G443700 Sobic002G366200--Sobic002G025500 Sobic007G064500 Sobic007G064500 Sobic002G366200--Sobic007G064500 Sobic002G366200--Sobic008G010500 Sobic002G366200--Sobic005G216400 Sobic002G366200--Sobic005G119900 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic007G015000 Sobic007G015000 Sobic005G060200--Sobic007G015000 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic002G178200 Sobic002G178200 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic007G177400--Sobic003G357700 Sobic007G177400--Sobic002G366200 Sobic007G177400--Sobic004G346300 Sobic007G177400--Sobic003G443700 Sobic007G177400--Sobic007G064500 Sobic007G177400--Sobic002G028632 Sobic007G177400--Sobic005G216400 Sobic007G177400--Sobic003G023600 Sobic007G177400--Sobic002G025500 Sobic007G111800--Sobic006G097900 Sobic007G111800--Sobic007G015000 Sobic007G111800--Sobic010G268700 Sobic001G271300 Sobic001G271300 Sobic007G111800--Sobic001G271300 Sobic007G111800--Sobic007G212000 Sobic007G111800--Sobic001G293100 Sobic005G106300 Sobic005G106300 Sobic007G111800--Sobic005G106300 Sobic010G152500 Sobic010G152500 Sobic007G111800--Sobic010G152500 Sobic003G083800 Sobic003G083800 Sobic007G111800--Sobic003G083800
Octagon: transcription factors


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