Gene annotation
Transcriptome id Sobic.007G111800.1,Sobic.007G111800.2
Synonym
Functional annotation lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
UniProt A0A1B6PH72 , A0A1Z5R9A6
Pfam PF05212
Panther DB PTHR31210 PTHR31210:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27470 : Protein of unknown function (DUF707)
RAP-DB (Rice) LOC_Os06g51200.1 : lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
MaizeGDB (Corn) Zm00025a030808 , Zm00025a030807
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
2 Sobic.007G015000 methyltransferase domain containing protein, expressed -
3 Sobic.010G268700 expansin precursor, putative, expressed -
4 Sobic.001G271300 expressed protein -
5 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
6 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.005G106300 expressed protein -
8 Sobic.010G152500 glycosyltransferase, putative, expressed -
9 Sobic.003G083800 DNA binding protein, putative, expressed -
10 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
11 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
13 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
15 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
16 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
17 Sobic.005G060200 cytochrome P450, putative, expressed -
18 Sobic.001G415100 terpene synthase, putative, expressed -
19 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
20 Sobic.004G308500 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase


Gene co-expression network
sample Sobic007G111800 Sobic007G111800 Sobic006G097900 Sobic006G097900 Sobic007G111800--Sobic006G097900 Sobic007G015000 Sobic007G015000 Sobic007G111800--Sobic007G015000 Sobic010G268700 Sobic010G268700 Sobic007G111800--Sobic010G268700 Sobic001G271300 Sobic001G271300 Sobic007G111800--Sobic001G271300 Sobic007G212000 Sobic007G212000 Sobic007G111800--Sobic007G212000 Sobic001G293100 Sobic001G293100 Sobic007G111800--Sobic001G293100 Sobic005G106300 Sobic005G106300 Sobic007G111800--Sobic005G106300 Sobic010G152500 Sobic010G152500 Sobic007G111800--Sobic010G152500 Sobic003G083800 Sobic003G083800 Sobic007G111800--Sobic003G083800 Sobic004G121600 Sobic004G121600 Sobic006G097900--Sobic004G121600 Sobic006G097900--Sobic010G268700 Sobic003G441700 Sobic003G441700 Sobic006G097900--Sobic003G441700 Sobic001G181600 Sobic001G181600 Sobic006G097900--Sobic001G181600 Sobic001G218400 Sobic001G218400 Sobic006G097900--Sobic001G218400 Sobic005G216600 Sobic005G216600 Sobic006G097900--Sobic005G216600 Sobic006G097900--Sobic001G293100 Sobic003G441800 Sobic003G441800 Sobic006G097900--Sobic003G441800 Sobic005G119900 Sobic005G119900 Sobic006G097900--Sobic005G119900 Sobic006G230100 Sobic006G230100 Sobic007G015000--Sobic006G230100 Sobic004G299500 Sobic004G299500 Sobic007G015000--Sobic004G299500 Sobic007G015000--Sobic001G293100 Sobic001G415100 Sobic001G415100 Sobic007G015000--Sobic001G415100 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic005G069166 Sobic005G069166 Sobic007G015000--Sobic005G069166 Sobic007G202480 Sobic007G202480 Sobic007G015000--Sobic007G202480 Sobic008G105800 Sobic008G105800 Sobic007G015000--Sobic008G105800 Sobic010G268700--Sobic006G097900 Sobic005G060200 Sobic005G060200 Sobic010G268700--Sobic005G060200 Sobic001G301000 Sobic001G301000 Sobic010G268700--Sobic001G301000 Sobic010G268700--Sobic005G216600 Sobic010G268700--Sobic001G293100 Sobic005G197500 Sobic005G197500 Sobic010G268700--Sobic005G197500 Sobic008G010500 Sobic008G010500 Sobic010G268700--Sobic008G010500 Sobic004G002901 Sobic004G002901 Sobic010G268700--Sobic004G002901 Sobic003G161400 Sobic003G161400 Sobic010G268700--Sobic003G161400 Sobic001G271300--Sobic005G197500 Sobic001G271300--Sobic010G268700 Sobic001G271300--Sobic007G111800 Sobic001G271300--Sobic001G415100 Sobic001G271300--Sobic005G097900 Sobic001G271300--Sobic001G293100 Sobic001G271300--Sobic005G060200 Sobic001G271300--Sobic007G212000 Sobic004G009200 Sobic004G009200 Sobic001G271300--Sobic004G009200 Sobic007G212000--Sobic007G015000 Sobic007G212000--Sobic006G230100 Sobic007G212000--Sobic008G105800 Sobic005G216400 Sobic005G216400 Sobic007G212000--Sobic005G216400 Sobic006G121000 Sobic006G121000 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic007G212000--Sobic005G060200 Sobic007G212000--Sobic001G181600 Sobic001G293100--Sobic007G015000 Sobic001G293100--Sobic005G097900 Sobic008G033100 Sobic008G033100 Sobic001G293100--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic001G293100--Sobic010G242800 Sobic001G293100--Sobic003G161400 Sobic005G182900 Sobic005G182900 Sobic001G293100--Sobic005G182900 Sobic001G293100--Sobic001G415100 Sobic002G029500 Sobic002G029500 Sobic001G293100--Sobic002G029500 Sobic001G293100--Sobic006G230100 Sobic005G106300--Sobic002G029500 Sobic005G106300--Sobic005G182900 Sobic005G106300--Sobic010G152500 Sobic005G106300--Sobic004G009200 Sobic005G106300--Sobic001G293100 Sobic005G106300--Sobic007G015000 Sobic005G106300--Sobic007G111800 Sobic007G015100 Sobic007G015100 Sobic005G106300--Sobic007G015100 Sobic005G106300--Sobic001G415100 Sobic003G382200 Sobic003G382200 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic010G152500--Sobic002G391900 Sobic010G152500--Sobic007G015100 Sobic009G106100 Sobic009G106100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic010G152500--Sobic002G029500 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic003G083800--Sobic009G106100 Sobic003G083800--Sobic007G015100 Sobic003G083800--Sobic010G152500 Sobic003G083800--Sobic002G029500 Sobic003G083800--Sobic004G009200 Sobic003G083800--Sobic005G106300 Sobic003G083800--Sobic007G111800 Sobic003G083800--Sobic005G182900 Sobic003G083800--Sobic010G242800
Octagon: transcription factors


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