Gene annotation
Transcriptome id Sobic.004G009200.1
Synonym ATNRT2.4, Sb04g000970, NRT2.4
Functional annotation transporter, major facilitator family, putative, expressed
UniProt C5XS78
Pfam PF07690
Panther DB PTHR23515 PTHR23515:SF2
NCBI CDD KOG2533; Permease of the major facilitator superfamily
KEGG Orthology K02575; NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G60770 : nitrate transporter 2.4
RAP-DB (Rice) LOC_Os02g02170.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a035073 , Zm00025a035072 , Zm00025a018689
Brachypodium KQJ92869 , KQK06399 , KQJ92870 , PNT65714 , PNT65713
Barley HORVU6Hr1G005930.1 , HORVU6Hr1G005600.1 , HORVU6Hr1G005600.3 , HORVU6Hr1G005600.2 , HORVU6Hr1G005780.1 , HORVU6Hr1G005770.1 , HORVU6Hr1G005770.2
Wheat TraesCS6B02G044500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
2 Sobic.010G152500 glycosyltransferase, putative, expressed -
3 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.003G382200 methyltransferase domain containing protein, expressed -
5 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
6 Sobic.005G106300 expressed protein -
7 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
8 Sobic.005G182800 NB-ARC domain containing protein, expressed -
9 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.001G271300 expressed protein -
11 Sobic.003G083800 DNA binding protein, putative, expressed -
12 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
14 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.005G216600 plant protein of unknown function domain containing protein, expressed -
16 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
17 Sobic.002G391900 peroxidase precursor, putative, expressed -
18 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
19 Sobic.010G268700 expansin precursor, putative, expressed -
20 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -


Gene co-expression network
sample Sobic004G009200 Sobic004G009200 Sobic005G197400 Sobic005G197400 Sobic004G009200--Sobic005G197400 Sobic010G152500 Sobic010G152500 Sobic004G009200--Sobic010G152500 Sobic005G197500 Sobic005G197500 Sobic004G009200--Sobic005G197500 Sobic003G382200 Sobic003G382200 Sobic004G009200--Sobic003G382200 Sobic009G106100 Sobic009G106100 Sobic004G009200--Sobic009G106100 Sobic005G106300 Sobic005G106300 Sobic004G009200--Sobic005G106300 Sobic007G154100 Sobic007G154100 Sobic004G009200--Sobic007G154100 Sobic005G182800 Sobic005G182800 Sobic004G009200--Sobic005G182800 Sobic007G015100 Sobic007G015100 Sobic004G009200--Sobic007G015100 Sobic005G197400--Sobic005G197500 Sobic005G197400--Sobic004G009200 Sobic005G066366 Sobic005G066366 Sobic005G197400--Sobic005G066366 Sobic005G182900 Sobic005G182900 Sobic005G197400--Sobic005G182900 Sobic010G242800 Sobic010G242800 Sobic005G197400--Sobic010G242800 Sobic008G033100 Sobic008G033100 Sobic005G197400--Sobic008G033100 Sobic005G216600 Sobic005G216600 Sobic005G197400--Sobic005G216600 Sobic002G019000 Sobic002G019000 Sobic005G197400--Sobic002G019000 Sobic005G110511 Sobic005G110511 Sobic005G197400--Sobic005G110511 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic010G152500--Sobic002G391900 Sobic010G152500--Sobic007G015100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic002G029500 Sobic002G029500 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic005G197500--Sobic005G197400 Sobic005G197500--Sobic004G009200 Sobic005G060200 Sobic005G060200 Sobic005G197500--Sobic005G060200 Sobic004G002901 Sobic004G002901 Sobic005G197500--Sobic004G002901 Sobic010G268700 Sobic010G268700 Sobic005G197500--Sobic010G268700 Sobic005G197500--Sobic005G182900 Sobic001G271300 Sobic001G271300 Sobic005G197500--Sobic001G271300 Sobic005G197500--Sobic010G242800 Sobic005G197500--Sobic008G033100 Sobic003G382200--Sobic010G152500 Sobic003G382200--Sobic002G391900 Sobic003G382200--Sobic004G009200 Sobic003G382200--Sobic009G106100 Sobic003G382200--Sobic005G216600 Sobic001G274400 Sobic001G274400 Sobic003G382200--Sobic001G274400 Sobic003G382200--Sobic005G106300 Sobic003G382200--Sobic005G182900 Sobic003G382200--Sobic005G197400 Sobic003G083800 Sobic003G083800 Sobic009G106100--Sobic003G083800 Sobic009G106100--Sobic010G152500 Sobic009G106100--Sobic004G009200 Sobic009G106100--Sobic003G382200 Sobic009G106100--Sobic005G106300 Sobic007G111800 Sobic007G111800 Sobic009G106100--Sobic007G111800 Sobic009G106100--Sobic002G391900 Sobic009G106100--Sobic005G216600 Sobic009G106100--Sobic005G197400 Sobic005G106300--Sobic002G029500 Sobic005G106300--Sobic005G182900 Sobic005G106300--Sobic010G152500 Sobic005G106300--Sobic004G009200 Sobic001G293100 Sobic001G293100 Sobic005G106300--Sobic001G293100 Sobic007G015000 Sobic007G015000 Sobic005G106300--Sobic007G015000 Sobic005G106300--Sobic007G111800 Sobic005G106300--Sobic007G015100 Sobic001G415100 Sobic001G415100 Sobic005G106300--Sobic001G415100 Sobic004G312500 Sobic004G312500 Sobic007G154100--Sobic004G312500 Sobic006G209000 Sobic006G209000 Sobic007G154100--Sobic006G209000 Sobic006G108300 Sobic006G108300 Sobic007G154100--Sobic006G108300 Sobic007G154100--Sobic004G009200 Sobic007G154100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic007G154100--Sobic005G071900 Sobic003G079100 Sobic003G079100 Sobic007G154100--Sobic003G079100 Sobic007G154100--Sobic009G106100 Sobic007G154100--Sobic005G182800 Sobic005G182800--Sobic005G182900 Sobic004G014600 Sobic004G014600 Sobic005G182800--Sobic004G014600 Sobic005G182800--Sobic003G079100 Sobic008G138900 Sobic008G138900 Sobic005G182800--Sobic008G138900 Sobic006G031100 Sobic006G031100 Sobic005G182800--Sobic006G031100 Sobic005G182800--Sobic002G019000 Sobic005G182800--Sobic005G216600 Sobic005G182800--Sobic004G009200 Sobic005G065700 Sobic005G065700 Sobic005G182800--Sobic005G065700 Sobic007G015100--Sobic002G029500 Sobic007G015100--Sobic010G152500 Sobic007G015100--Sobic003G083800 Sobic007G015100--Sobic005G106300 Sobic007G015100--Sobic004G009200 Sobic002G082000 Sobic002G082000 Sobic007G015100--Sobic002G082000 Sobic007G015100--Sobic005G182900 Sobic007G015100--Sobic003G079100 Sobic007G015100--Sobic001G293100
Octagon: transcription factors


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