Gene annotation
Transcriptome id Sobic.007G015100.1
Synonym CYP89A9, Sb07g001360
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5YLZ8
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF82
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G64940 : cytochrome P450, family 87, subfamily A, polypeptide 6
RAP-DB (Rice) LOC_Os01g24810.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a030271 , Zm00025a040239
Brachypodium -
Barley HORVU2Hr1G098890.2 , HORVU2Hr1G098890.1 , HORVU5Hr1G084710.2 , HORVU5Hr1G084710.1
Wheat TraesCS2B02G440800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
2 Sobic.010G152500 glycosyltransferase, putative, expressed -
3 Sobic.003G083800 DNA binding protein, putative, expressed -
4 Sobic.005G106300 expressed protein -
5 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
6 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
7 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
9 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
11 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
12 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
13 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
14 Sobic.007G015000 methyltransferase domain containing protein, expressed -
15 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
17 Sobic.001G415100 terpene synthase, putative, expressed -
18 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
19 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.002G289500 carbohydrate binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G015100 Sobic007G015100 Sobic002G029500 Sobic002G029500 Sobic007G015100--Sobic002G029500 Sobic010G152500 Sobic010G152500 Sobic007G015100--Sobic010G152500 Sobic003G083800 Sobic003G083800 Sobic007G015100--Sobic003G083800 Sobic005G106300 Sobic005G106300 Sobic007G015100--Sobic005G106300 Sobic004G009200 Sobic004G009200 Sobic007G015100--Sobic004G009200 Sobic002G082000 Sobic002G082000 Sobic007G015100--Sobic002G082000 Sobic005G182900 Sobic005G182900 Sobic007G015100--Sobic005G182900 Sobic003G079100 Sobic003G079100 Sobic007G015100--Sobic003G079100 Sobic001G293100 Sobic001G293100 Sobic007G015100--Sobic001G293100 Sobic002G029500--Sobic005G182900 Sobic007G064900 Sobic007G064900 Sobic002G029500--Sobic007G064900 Sobic005G097900 Sobic005G097900 Sobic002G029500--Sobic005G097900 Sobic002G029500--Sobic005G106300 Sobic008G033100 Sobic008G033100 Sobic002G029500--Sobic008G033100 Sobic002G289500 Sobic002G289500 Sobic002G029500--Sobic002G289500 Sobic001G415100 Sobic001G415100 Sobic002G029500--Sobic001G415100 Sobic007G015000 Sobic007G015000 Sobic002G029500--Sobic007G015000 Sobic002G029500--Sobic002G082000 Sobic003G382200 Sobic003G382200 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic010G152500--Sobic002G391900 Sobic010G152500--Sobic007G015100 Sobic009G106100 Sobic009G106100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic003G083800--Sobic009G106100 Sobic003G083800--Sobic007G015100 Sobic003G083800--Sobic010G152500 Sobic003G083800--Sobic002G029500 Sobic003G083800--Sobic004G009200 Sobic003G083800--Sobic005G106300 Sobic007G111800 Sobic007G111800 Sobic003G083800--Sobic007G111800 Sobic003G083800--Sobic005G182900 Sobic010G242800 Sobic010G242800 Sobic003G083800--Sobic010G242800 Sobic005G106300--Sobic002G029500 Sobic005G106300--Sobic005G182900 Sobic005G106300--Sobic010G152500 Sobic005G106300--Sobic004G009200 Sobic005G106300--Sobic001G293100 Sobic005G106300--Sobic007G015000 Sobic005G106300--Sobic007G111800 Sobic005G106300--Sobic007G015100 Sobic005G106300--Sobic001G415100 Sobic005G197400 Sobic005G197400 Sobic004G009200--Sobic005G197400 Sobic004G009200--Sobic010G152500 Sobic005G197500 Sobic005G197500 Sobic004G009200--Sobic005G197500 Sobic004G009200--Sobic003G382200 Sobic004G009200--Sobic009G106100 Sobic004G009200--Sobic005G106300 Sobic007G154100 Sobic007G154100 Sobic004G009200--Sobic007G154100 Sobic005G182800 Sobic005G182800 Sobic004G009200--Sobic005G182800 Sobic004G009200--Sobic007G015100 Sobic002G082000--Sobic002G029500 Sobic002G391300 Sobic002G391300 Sobic002G082000--Sobic002G391300 Sobic002G111900 Sobic002G111900 Sobic002G082000--Sobic002G111900 Sobic005G134200 Sobic005G134200 Sobic002G082000--Sobic005G134200 Sobic006G047200 Sobic006G047200 Sobic002G082000--Sobic006G047200 Sobic006G059800 Sobic006G059800 Sobic002G082000--Sobic006G059800 Sobic002G082000--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic002G082000--Sobic006G171100 Sobic005G035900 Sobic005G035900 Sobic002G082000--Sobic005G035900 Sobic005G182900--Sobic008G033100 Sobic002G019000 Sobic002G019000 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G065700 Sobic005G065700 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic003G161400 Sobic003G161400 Sobic005G182900--Sobic003G161400 Sobic005G182900--Sobic001G293100 Sobic002G029600 Sobic002G029600 Sobic003G079100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic003G079100--Sobic002G029500 Sobic003G079100--Sobic005G182800 Sobic010G213600 Sobic010G213600 Sobic003G079100--Sobic010G213600 Sobic003G079100--Sobic005G182900 Sobic003G079100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic003G079100--Sobic005G071900 Sobic001G293100--Sobic007G015000 Sobic001G293100--Sobic005G097900 Sobic001G293100--Sobic008G033100 Sobic001G293100--Sobic010G242800 Sobic001G293100--Sobic003G161400 Sobic001G293100--Sobic005G182900 Sobic001G293100--Sobic001G415100 Sobic001G293100--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic001G293100--Sobic006G230100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.