Gene annotation
Transcriptome id Sobic.003G083800.1
Synonym Sb03g007060
Functional annotation DNA binding protein, putative, expressed
UniProt A0A1B6Q265
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G68380 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os01g04210.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a023582 , Zm00025a025077 , Zm00025a057513 , Zm00025a026612 , Zm00025a035572 , Zm00025a004842
Brachypodium -
Barley HORVU3Hr1G081930.4 , HORVU3Hr1G081930.5 , HORVU3Hr1G081930.2 , HORVU3Hr1G081930.3 , HORVU3Hr1G081930.1
Wheat TraesCS3B02G418600 , TraesCS5D02G015600 , TraesCS3A02G036900 , TraesCS5A02G010800 , TraesCS3D02G043100 , TraesCS3A02G386500 , TraesCS3D02G043200 , TraesCS3D02G042700 , TraesCS3B02G046900 , TraesCS3D02G379500 , TraesCS3A02G037000 , TraesCS3B02G047000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
2 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.010G152500 glycosyltransferase, putative, expressed -
4 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
5 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
6 Sobic.005G106300 expressed protein -
7 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
8 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
10 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
11 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
12 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G110511 - -
14 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
17 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
18 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
19 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
20 Sobic.003G382200 methyltransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic003G083800 Sobic003G083800 Sobic009G106100 Sobic009G106100 Sobic003G083800--Sobic009G106100 Sobic007G015100 Sobic007G015100 Sobic003G083800--Sobic007G015100 Sobic010G152500 Sobic010G152500 Sobic003G083800--Sobic010G152500 Sobic002G029500 Sobic002G029500 Sobic003G083800--Sobic002G029500 Sobic004G009200 Sobic004G009200 Sobic003G083800--Sobic004G009200 Sobic005G106300 Sobic005G106300 Sobic003G083800--Sobic005G106300 Sobic007G111800 Sobic007G111800 Sobic003G083800--Sobic007G111800 Sobic005G182900 Sobic005G182900 Sobic003G083800--Sobic005G182900 Sobic010G242800 Sobic010G242800 Sobic003G083800--Sobic010G242800 Sobic009G106100--Sobic003G083800 Sobic009G106100--Sobic010G152500 Sobic009G106100--Sobic004G009200 Sobic003G382200 Sobic003G382200 Sobic009G106100--Sobic003G382200 Sobic009G106100--Sobic005G106300 Sobic009G106100--Sobic007G111800 Sobic002G391900 Sobic002G391900 Sobic009G106100--Sobic002G391900 Sobic005G216600 Sobic005G216600 Sobic009G106100--Sobic005G216600 Sobic005G197400 Sobic005G197400 Sobic009G106100--Sobic005G197400 Sobic007G015100--Sobic002G029500 Sobic007G015100--Sobic010G152500 Sobic007G015100--Sobic003G083800 Sobic007G015100--Sobic005G106300 Sobic007G015100--Sobic004G009200 Sobic002G082000 Sobic002G082000 Sobic007G015100--Sobic002G082000 Sobic007G015100--Sobic005G182900 Sobic003G079100 Sobic003G079100 Sobic007G015100--Sobic003G079100 Sobic001G293100 Sobic001G293100 Sobic007G015100--Sobic001G293100 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic010G152500--Sobic002G391900 Sobic010G152500--Sobic007G015100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic002G029500--Sobic005G182900 Sobic007G064900 Sobic007G064900 Sobic002G029500--Sobic007G064900 Sobic005G097900 Sobic005G097900 Sobic002G029500--Sobic005G097900 Sobic002G029500--Sobic005G106300 Sobic008G033100 Sobic008G033100 Sobic002G029500--Sobic008G033100 Sobic002G289500 Sobic002G289500 Sobic002G029500--Sobic002G289500 Sobic001G415100 Sobic001G415100 Sobic002G029500--Sobic001G415100 Sobic007G015000 Sobic007G015000 Sobic002G029500--Sobic007G015000 Sobic002G029500--Sobic002G082000 Sobic004G009200--Sobic005G197400 Sobic004G009200--Sobic010G152500 Sobic005G197500 Sobic005G197500 Sobic004G009200--Sobic005G197500 Sobic004G009200--Sobic003G382200 Sobic004G009200--Sobic009G106100 Sobic004G009200--Sobic005G106300 Sobic007G154100 Sobic007G154100 Sobic004G009200--Sobic007G154100 Sobic005G182800 Sobic005G182800 Sobic004G009200--Sobic005G182800 Sobic004G009200--Sobic007G015100 Sobic005G106300--Sobic002G029500 Sobic005G106300--Sobic005G182900 Sobic005G106300--Sobic010G152500 Sobic005G106300--Sobic004G009200 Sobic005G106300--Sobic001G293100 Sobic005G106300--Sobic007G015000 Sobic005G106300--Sobic007G111800 Sobic005G106300--Sobic007G015100 Sobic005G106300--Sobic001G415100 Sobic007G111800--Sobic006G097900 Sobic007G111800--Sobic007G015000 Sobic010G268700 Sobic010G268700 Sobic007G111800--Sobic010G268700 Sobic001G271300 Sobic001G271300 Sobic007G111800--Sobic001G271300 Sobic007G212000 Sobic007G212000 Sobic007G111800--Sobic007G212000 Sobic007G111800--Sobic001G293100 Sobic007G111800--Sobic005G106300 Sobic007G111800--Sobic010G152500 Sobic007G111800--Sobic003G083800 Sobic005G182900--Sobic008G033100 Sobic002G019000 Sobic002G019000 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G065700 Sobic005G065700 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic003G161400 Sobic003G161400 Sobic005G182900--Sobic003G161400 Sobic005G182900--Sobic001G293100 Sobic010G242800--Sobic008G033100 Sobic010G242800--Sobic005G182900 Sobic010G242800--Sobic003G161400 Sobic010G242800--Sobic001G293100 Sobic005G066366 Sobic005G066366 Sobic010G242800--Sobic005G066366 Sobic005G110511 Sobic005G110511 Sobic010G242800--Sobic005G110511 Sobic010G242800--Sobic005G097900 Sobic010G242800--Sobic007G064900 Sobic010G242800--Sobic002G029500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.