Gene annotation
Transcriptome id Sobic.005G071900.1,Sobic.005G071900.2
Synonym Sb05g005940, RPS3, RPM1
Functional annotation expressed protein
UniProt C5Y6R6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF621
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) ChrUn.fgenesh.mRNA.29 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCSU02G185000 , TraesCSU02G238300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
2 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
3 Sobic.005G066500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.005G110511 - -
5 Sobic.006G108300 expressed protein -
6 Sobic.006G009700 expressed protein -
7 Sobic.008G138700 MLA12, putative, expressed -
8 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
9 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
10 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
11 Sobic.002G411000 AP2 domain containing protein, expressed -
12 Sobic.010G152500 glycosyltransferase, putative, expressed -
13 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
14 Sobic.002G019000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
15 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
16 Sobic.001G506700 exostosin family domain containing protein, expressed -
17 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
18 Sobic.010G213600 histidine kinase, putative, expressed -
19 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'


Gene co-expression network
sample Sobic005G071900 Sobic005G071900 Sobic005G065700 Sobic005G065700 Sobic005G071900--Sobic005G065700 Sobic004G312500 Sobic004G312500 Sobic005G071900--Sobic004G312500 Sobic005G066500 Sobic005G066500 Sobic005G071900--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G071900--Sobic005G110511 Sobic006G108300 Sobic006G108300 Sobic005G071900--Sobic006G108300 Sobic006G009700 Sobic006G009700 Sobic005G071900--Sobic006G009700 Sobic008G138700 Sobic008G138700 Sobic005G071900--Sobic008G138700 Sobic003G079100 Sobic003G079100 Sobic005G071900--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic005G071900--Sobic002G029600 Sobic002G019000 Sobic002G019000 Sobic005G065700--Sobic002G019000 Sobic005G065700--Sobic005G071900 Sobic005G182900 Sobic005G182900 Sobic005G065700--Sobic005G182900 Sobic005G065700--Sobic005G066500 Sobic005G065700--Sobic005G110511 Sobic010G213600 Sobic010G213600 Sobic005G065700--Sobic010G213600 Sobic005G065700--Sobic003G079100 Sobic008G033100 Sobic008G033100 Sobic005G065700--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G065700--Sobic010G242800 Sobic004G312500--Sobic005G071900 Sobic004G312500--Sobic006G108300 Sobic004G312500--Sobic005G110511 Sobic004G312500--Sobic006G009700 Sobic007G154100 Sobic007G154100 Sobic004G312500--Sobic007G154100 Sobic004G312500--Sobic005G066500 Sobic004G312500--Sobic008G138700 Sobic004G312500--Sobic005G065700 Sobic002G411000 Sobic002G411000 Sobic004G312500--Sobic002G411000 Sobic005G066500--Sobic005G110511 Sobic005G066500--Sobic005G065700 Sobic005G066500--Sobic005G071900 Sobic005G066500--Sobic008G138700 Sobic005G066500--Sobic004G312500 Sobic005G197350 Sobic005G197350 Sobic005G066500--Sobic005G197350 Sobic005G066500--Sobic006G009700 Sobic005G066500--Sobic002G019000 Sobic005G066500--Sobic002G411000 Sobic005G110511--Sobic005G066500 Sobic005G110511--Sobic010G242800 Sobic005G066366 Sobic005G066366 Sobic005G110511--Sobic005G066366 Sobic005G110511--Sobic004G312500 Sobic005G110511--Sobic005G065700 Sobic005G110511--Sobic005G071900 Sobic002G029500 Sobic002G029500 Sobic005G110511--Sobic002G029500 Sobic007G064900 Sobic007G064900 Sobic005G110511--Sobic007G064900 Sobic005G110511--Sobic008G033100 Sobic006G108300--Sobic004G312500 Sobic006G108300--Sobic005G071900 Sobic006G108300--Sobic007G154100 Sobic006G108300--Sobic002G411000 Sobic006G108300--Sobic006G009700 Sobic006G108300--Sobic003G079100 Sobic006G209000 Sobic006G209000 Sobic006G108300--Sobic006G209000 Sobic006G108300--Sobic002G029600 Sobic002G019100 Sobic002G019100 Sobic006G108300--Sobic002G019100 Sobic006G009700--Sobic008G138700 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G009700--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic006G009700--Sobic001G238500 Sobic006G009700--Sobic005G066500 Sobic002G238700 Sobic002G238700 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300 Sobic008G138700--Sobic006G009700 Sobic009G060700 Sobic009G060700 Sobic008G138700--Sobic009G060700 Sobic008G138700--Sobic005G066500 Sobic008G138700--Sobic005G065700 Sobic008G138700--Sobic005G110511 Sobic008G138700--Sobic005G071900 Sobic008G138700--Sobic004G312500 Sobic006G092100 Sobic006G092100 Sobic008G138700--Sobic006G092100 Sobic008G138700--Sobic010G213600 Sobic003G079100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic003G079100--Sobic005G071900 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic002G029600--Sobic005G065700 Sobic002G029600--Sobic010G152500 Sobic002G029600--Sobic005G071900 Sobic007G090600 Sobic007G090600 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600
Octagon: transcription factors


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