Gene annotation
Transcriptome id Sobic.006G108300.3,Sobic.006G108300.2,Sobic.006G108300.1
Synonym Sb06g019090
Functional annotation expressed protein
UniProt A0A1B6PLE3 , A0A1B6PLD1 , A0A1B6PLE6
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF327
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25530 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os04g38860.2,LOC_Os04g38860.1 : expressed protein
MaizeGDB (Corn) Zm00025a011107 , Zm00025a030209 , Zm00025a040337 , Zm00025a054737 , Zm00025a040338 , Zm00025a040344 , Zm00025a009656 , Zm00025a040343
Brachypodium KQJ82995 , KQJ82996 , KQJ94928 , KQJ94929
Barley HORVU7Hr1G032060.4 , HORVU7Hr1G032060.5 , HORVU7Hr1G032060.2 , HORVU7Hr1G032060.3 , HORVU7Hr1G032060.1 , HORVU7Hr1G074660.6 , HORVU7Hr1G074660.7 , HORVU7Hr1G074660.4 , HORVU7Hr1G074660.5 , HORVU7Hr1G074660.2 , HORVU7Hr1G074660.3 , HORVU7Hr1G074660.1 , HORVU7Hr1G074660.8 , HORVU7Hr1G074660.9 , HORVU2Hr1G080590.2 , HORVU2Hr1G080590.3 , HORVU2Hr1G080590.1 , HORVU2Hr1G080590.4 , HORVU2Hr1G080590.5 , HORVU7Hr1G074660.10 , HORVU7Hr1G074660.11 , HORVU7Hr1G074660.12
Wheat TraesCS2D02G325500 , TraesCS2A02G337400 , TraesCS7B02G060400 , TraesCS7D02G157000 , TraesCS2A02G584328 , TraesCS7A02G313000 , TraesCS7B02G213000 , TraesCS2B02G344500 , TraesCS7D02G309400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
2 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
3 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.002G411000 AP2 domain containing protein, expressed -
5 Sobic.006G009700 expressed protein -
6 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
7 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
8 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
9 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
10 Sobic.005G110511 - -
11 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
12 Sobic.010G152500 glycosyltransferase, putative, expressed -
13 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
14 Sobic.008G138700 MLA12, putative, expressed -
15 Sobic.001G506600 exostosin family domain containing protein, expressed -
16 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
17 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
19 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.005G066500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G108300 Sobic006G108300 Sobic004G312500 Sobic004G312500 Sobic006G108300--Sobic004G312500 Sobic005G071900 Sobic005G071900 Sobic006G108300--Sobic005G071900 Sobic007G154100 Sobic007G154100 Sobic006G108300--Sobic007G154100 Sobic002G411000 Sobic002G411000 Sobic006G108300--Sobic002G411000 Sobic006G009700 Sobic006G009700 Sobic006G108300--Sobic006G009700 Sobic003G079100 Sobic003G079100 Sobic006G108300--Sobic003G079100 Sobic006G209000 Sobic006G209000 Sobic006G108300--Sobic006G209000 Sobic002G029600 Sobic002G029600 Sobic006G108300--Sobic002G029600 Sobic002G019100 Sobic002G019100 Sobic006G108300--Sobic002G019100 Sobic004G312500--Sobic005G071900 Sobic004G312500--Sobic006G108300 Sobic005G110511 Sobic005G110511 Sobic004G312500--Sobic005G110511 Sobic004G312500--Sobic006G009700 Sobic004G312500--Sobic007G154100 Sobic005G066500 Sobic005G066500 Sobic004G312500--Sobic005G066500 Sobic008G138700 Sobic008G138700 Sobic004G312500--Sobic008G138700 Sobic005G065700 Sobic005G065700 Sobic004G312500--Sobic005G065700 Sobic004G312500--Sobic002G411000 Sobic005G071900--Sobic005G065700 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G071900--Sobic005G110511 Sobic005G071900--Sobic006G108300 Sobic005G071900--Sobic006G009700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic005G071900--Sobic002G029600 Sobic007G154100--Sobic004G312500 Sobic007G154100--Sobic006G209000 Sobic007G154100--Sobic006G108300 Sobic004G009200 Sobic004G009200 Sobic007G154100--Sobic004G009200 Sobic010G152500 Sobic010G152500 Sobic007G154100--Sobic010G152500 Sobic007G154100--Sobic005G071900 Sobic007G154100--Sobic003G079100 Sobic009G106100 Sobic009G106100 Sobic007G154100--Sobic009G106100 Sobic005G182800 Sobic005G182800 Sobic007G154100--Sobic005G182800 Sobic005G066300 Sobic005G066300 Sobic002G411000--Sobic005G066300 Sobic002G411000--Sobic006G108300 Sobic002G411000--Sobic004G312500 Sobic002G411000--Sobic005G071900 Sobic002G411000--Sobic006G009700 Sobic002G411000--Sobic005G066500 Sobic001G506700 Sobic001G506700 Sobic002G411000--Sobic001G506700 Sobic001G506600 Sobic001G506600 Sobic002G411000--Sobic001G506600 Sobic010G274400 Sobic010G274400 Sobic002G411000--Sobic010G274400 Sobic006G009700--Sobic008G138700 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G009700--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic006G009700--Sobic001G238500 Sobic006G009700--Sobic005G066500 Sobic002G238700 Sobic002G238700 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300 Sobic003G079100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic002G029500 Sobic002G029500 Sobic003G079100--Sobic002G029500 Sobic003G079100--Sobic005G182800 Sobic010G213600 Sobic010G213600 Sobic003G079100--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic003G079100--Sobic005G182900 Sobic003G079100--Sobic010G152500 Sobic003G079100--Sobic005G071900 Sobic006G209000--Sobic007G154100 Sobic006G209000--Sobic006G108300 Sobic006G209000--Sobic005G071900 Sobic006G209000--Sobic004G312500 Sobic001G503000 Sobic001G503000 Sobic006G209000--Sobic001G503000 Sobic006G209000--Sobic002G029600 Sobic010G096700 Sobic010G096700 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic006G209000--Sobic009G106100 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic002G029600--Sobic005G065700 Sobic002G029600--Sobic010G152500 Sobic002G029600--Sobic005G071900 Sobic007G090600 Sobic007G090600 Sobic002G029600--Sobic007G090600 Sobic002G029600--Sobic001G506600 Sobic002G019100--Sobic006G009700 Sobic005G104200 Sobic005G104200 Sobic002G019100--Sobic005G104200 Sobic009G060700 Sobic009G060700 Sobic002G019100--Sobic009G060700 Sobic002G019100--Sobic006G108300 Sobic002G019100--Sobic008G138700 Sobic008G084900 Sobic008G084900 Sobic002G019100--Sobic008G084900 Sobic002G019100--Sobic001G506600 Sobic002G019100--Sobic001G506700 Sobic002G019100--Sobic002G029600
Octagon: transcription factors


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