Gene annotation
Transcriptome id Sobic.010G213600.5,Sobic.010G213600.3,Sobic.010G213600.2,Sobic.010G213600.4,Sobic.010G213600.1
Synonym AHK5, CKI2, Sb10g026020, HK5
Functional annotation histidine kinase, putative, expressed
UniProt C5Z771
Pfam PF00512 PF02518 PF00072
Panther DB PTHR24423 PTHR24423:SF475
NCBI CDD KOG0519; Sensory transduction histidine kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction GO:0000155phosphorelay sensor kinase activity GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT5G10720 : histidine kinase 5
RAP-DB (Rice) LOC_Os06g44410.1 : histidine kinase, putative, expressed
MaizeGDB (Corn) Zm00025a051720 , Zm00025a042012
Brachypodium KQK16880
Barley HORVU2Hr1G106760.1 , HORVU3Hr1G067780.2 , HORVU3Hr1G069130.1 , HORVU5Hr1G112760.2 , HORVU2Hr1G064930.2
Wheat TraesCS2A02G472800 , TraesCS2A02G472800 , TraesCS7B02G405100 , TraesCS2B02G495500 , TraesCS7D02G485500 , TraesCS2D02G472500 , TraesCS7A02G498200 , TraesCS7A02G498200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
2 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.002G019000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
5 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
8 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -
9 Sobic.001G342000 expressed protein -
10 Sobic.005G226400 RGH1A, putative, expressed -
11 Sobic.006G092100 no apical meristem protein, putative, expressed -
12 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
13 Sobic.003G441601 - -
14 Sobic.006G171100 expansin precursor, putative, expressed -
15 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
17 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
18 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
20 Sobic.010G152300 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic010G213600 Sobic010G213600 Sobic008G033100 Sobic008G033100 Sobic010G213600--Sobic008G033100 Sobic005G065700 Sobic005G065700 Sobic010G213600--Sobic005G065700 Sobic002G019000 Sobic002G019000 Sobic010G213600--Sobic002G019000 Sobic004G014600 Sobic004G014600 Sobic010G213600--Sobic004G014600 Sobic005G182900 Sobic005G182900 Sobic010G213600--Sobic005G182900 Sobic009G165100 Sobic009G165100 Sobic010G213600--Sobic009G165100 Sobic003G079100 Sobic003G079100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000 Sobic010G242800 Sobic010G242800 Sobic008G033100--Sobic010G242800 Sobic008G033100--Sobic005G182900 Sobic001G293100 Sobic001G293100 Sobic008G033100--Sobic001G293100 Sobic008G033100--Sobic003G161400 Sobic005G097900 Sobic005G097900 Sobic008G033100--Sobic005G097900 Sobic008G033100--Sobic002G019000 Sobic008G033100--Sobic010G213600 Sobic002G029500 Sobic002G029500 Sobic008G033100--Sobic002G029500 Sobic001G415100 Sobic001G415100 Sobic008G033100--Sobic001G415100 Sobic005G065700--Sobic002G019000 Sobic005G071900 Sobic005G071900 Sobic005G065700--Sobic005G071900 Sobic005G065700--Sobic005G182900 Sobic005G066500 Sobic005G066500 Sobic005G065700--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G065700--Sobic005G110511 Sobic005G065700--Sobic010G213600 Sobic005G065700--Sobic003G079100 Sobic005G065700--Sobic008G033100 Sobic005G065700--Sobic010G242800 Sobic002G019000--Sobic005G182900 Sobic002G019000--Sobic005G065700 Sobic002G019000--Sobic008G033100 Sobic002G019000--Sobic010G213600 Sobic002G019000--Sobic009G165100 Sobic002G019000--Sobic010G242800 Sobic002G019000--Sobic002G029500 Sobic007G064900 Sobic007G064900 Sobic002G019000--Sobic007G064900 Sobic002G019000--Sobic003G161400 Sobic003G441601 Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic004G014600--Sobic007G090600 Sobic004G014600--Sobic009G165100 Sobic005G182800 Sobic005G182800 Sobic004G014600--Sobic005G182800 Sobic004G014600--Sobic003G079100 Sobic004G014600--Sobic010G213600 Sobic004G014600--Sobic005G182900 Sobic006G031100 Sobic006G031100 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic005G182900--Sobic008G033100 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic005G182900--Sobic003G161400 Sobic005G182900--Sobic001G293100 Sobic009G165100--Sobic004G014600 Sobic009G165100--Sobic003G441601 Sobic009G165100--Sobic002G019000 Sobic002G391300 Sobic002G391300 Sobic009G165100--Sobic002G391300 Sobic009G165100--Sobic005G065700 Sobic009G165100--Sobic005G182900 Sobic009G165100--Sobic010G213600 Sobic002G111900 Sobic002G111900 Sobic009G165100--Sobic002G111900 Sobic009G165100--Sobic002G289500 Sobic002G029600 Sobic002G029600 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic003G079100--Sobic002G029500 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic003G079100--Sobic005G071900 Sobic003G161400--Sobic008G033100 Sobic003G161400--Sobic010G242800 Sobic003G161400--Sobic001G293100 Sobic003G161400--Sobic005G182900 Sobic007G015000 Sobic007G015000 Sobic003G161400--Sobic007G015000 Sobic010G268700 Sobic010G268700 Sobic003G161400--Sobic010G268700 Sobic003G161400--Sobic010G213600 Sobic003G161400--Sobic001G415100 Sobic003G161400--Sobic005G097900 Sobic001G342000--Sobic004G014600 Sobic001G342000--Sobic010G213600 Sobic001G342000--Sobic008G033100 Sobic002G166150 Sobic002G166150 Sobic001G342000--Sobic002G166150 Sobic001G342000--Sobic002G029500 Sobic001G342000--Sobic009G165100 Sobic001G342000--Sobic003G079100 Sobic001G272800 Sobic001G272800 Sobic001G342000--Sobic001G272800 Sobic003G255600 Sobic003G255600 Sobic001G342000--Sobic003G255600
Octagon: transcription factors


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