Gene annotation
Transcriptome id Sobic.004G014600.1
Synonym Sb04g001410
Functional annotation disease resistance protein RGA2, putative, expressed
UniProt C5XSD6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF496
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os02g18000.1 : disease resistance protein RGA2, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ94412 , KQJ94411 , PNT66343
Barley -
Wheat TraesCS6B02G107700 , TraesCS2B02G618800 , TraesCS2A02G560600 , TraesCS5D02G532400 , TraesCS2D02G568700 , TraesCS2D02G569400 , TraesCS7B02G393300 , TraesCS7B02G393300 , TraesCS4A02G335500 , TraesCSU02G188000 , TraesCS2B02G587400 , TraesCS7D02G476500 , TraesCS5B02G535400 , TraesCS5B02G535100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G441601 - -
2 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
3 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.005G182800 NB-ARC domain containing protein, expressed -
5 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
6 Sobic.010G213600 histidine kinase, putative, expressed -
7 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
9 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
10 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
11 Sobic.002G111900 receptor-like kinase, putative, expressed -
12 Sobic.001G342000 expressed protein -
13 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G171100 expansin precursor, putative, expressed -
15 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
16 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
17 Sobic.005G046400 - -
18 Sobic.010G152500 glycosyltransferase, putative, expressed -
19 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic004G014600 Sobic004G014600 Sobic003G441601 Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic004G014600--Sobic007G090600 Sobic009G165100 Sobic009G165100 Sobic004G014600--Sobic009G165100 Sobic005G182800 Sobic005G182800 Sobic004G014600--Sobic005G182800 Sobic003G079100 Sobic003G079100 Sobic004G014600--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic004G014600--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic004G014600--Sobic005G182900 Sobic006G031100 Sobic006G031100 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic002G391300 Sobic002G391300 Sobic003G441601--Sobic002G391300 Sobic005G046400 Sobic005G046400 Sobic003G441601--Sobic005G046400 Sobic002G111900 Sobic002G111900 Sobic003G441601--Sobic002G111900 Sobic006G171100 Sobic006G171100 Sobic003G441601--Sobic006G171100 Sobic010G010000 Sobic010G010000 Sobic003G441601--Sobic010G010000 Sobic003G441800 Sobic003G441800 Sobic003G441601--Sobic003G441800 Sobic003G441601--Sobic002G289500 Sobic010G191700 Sobic010G191700 Sobic003G441601--Sobic010G191700 Sobic003G441601--Sobic004G014600 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic004G322000 Sobic004G322000 Sobic007G090600--Sobic004G322000 Sobic003G215300 Sobic003G215300 Sobic007G090600--Sobic003G215300 Sobic007G090600--Sobic004G014600 Sobic006G196400 Sobic006G196400 Sobic007G090600--Sobic006G196400 Sobic006G205700 Sobic006G205700 Sobic007G090600--Sobic006G205700 Sobic003G240400 Sobic003G240400 Sobic007G090600--Sobic003G240400 Sobic002G115600 Sobic002G115600 Sobic007G090600--Sobic002G115600 Sobic009G165100--Sobic004G014600 Sobic009G165100--Sobic003G441601 Sobic002G019000 Sobic002G019000 Sobic009G165100--Sobic002G019000 Sobic009G165100--Sobic002G391300 Sobic005G065700 Sobic005G065700 Sobic009G165100--Sobic005G065700 Sobic009G165100--Sobic005G182900 Sobic009G165100--Sobic010G213600 Sobic009G165100--Sobic002G111900 Sobic009G165100--Sobic002G289500 Sobic005G182800--Sobic005G182900 Sobic005G182800--Sobic004G014600 Sobic005G182800--Sobic003G079100 Sobic008G138900 Sobic008G138900 Sobic005G182800--Sobic008G138900 Sobic005G182800--Sobic006G031100 Sobic005G182800--Sobic002G019000 Sobic005G216600 Sobic005G216600 Sobic005G182800--Sobic005G216600 Sobic004G009200 Sobic004G009200 Sobic005G182800--Sobic004G009200 Sobic005G182800--Sobic005G065700 Sobic002G029600 Sobic002G029600 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic002G029500 Sobic002G029500 Sobic003G079100--Sobic002G029500 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic003G079100--Sobic005G071900 Sobic008G033100 Sobic008G033100 Sobic010G213600--Sobic008G033100 Sobic010G213600--Sobic005G065700 Sobic010G213600--Sobic002G019000 Sobic010G213600--Sobic004G014600 Sobic010G213600--Sobic005G182900 Sobic010G213600--Sobic009G165100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000 Sobic005G182900--Sobic008G033100 Sobic005G182900--Sobic002G019000 Sobic010G242800 Sobic010G242800 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic001G415100 Sobic001G415100 Sobic005G182900--Sobic001G415100 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic005G182900--Sobic003G161400 Sobic001G293100 Sobic001G293100 Sobic005G182900--Sobic001G293100 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic006G031100--Sobic002G029600 Sobic006G031100--Sobic004G014600 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic006G031100--Sobic004G322000 Sobic006G031100--Sobic006G205700 Sobic002G289500--Sobic002G391300 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic002G289500--Sobic001G153100 Sobic009G136800 Sobic009G136800 Sobic002G289500--Sobic009G136800 Sobic002G289500--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic002G289500--Sobic006G230100 Sobic002G063700 Sobic002G063700 Sobic002G289500--Sobic002G063700
Octagon: transcription factors


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