Gene annotation
Transcriptome id Sobic.001G506700.1
Synonym MUR3, KAM1, Sb01g047300
Functional annotation exostosin family domain containing protein, expressed
UniProt A0A1B6QQJ6
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF71
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20370 : Exostosin family protein
RAP-DB (Rice) LOC_Os03g05060.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000603 , Zm00025a000602 , Zm00025a000600 , Zm00025a000605 , Zm00025a000604 , Zm00025a053402 , Zm00025a006697
Brachypodium KQJ96968 , PNT67496
Barley HORVU4Hr1G079020.1 , HORVU4Hr1G079020.2 , HORVU4Hr1G079010.1 , HORVU4Hr1G079010.3 , HORVU4Hr1G079010.2 , HORVU4Hr1G079010.5 , HORVU4Hr1G079010.4 , HORVU4Hr1G078990.3
Wheat TraesCS4D02G306900 , TraesCS4B02G308500 , TraesCS4A02G408200 , TraesCS4A02G408200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G411000 AP2 domain containing protein, expressed -
2 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
5 Sobic.001G506600 exostosin family domain containing protein, expressed -
6 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
7 Sobic.006G009700 expressed protein -
8 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
9 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.008G138900 MLA12, putative, expressed -
11 Sobic.008G138700 MLA12, putative, expressed -
12 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.010G096700 leaf senescence related protein, putative, expressed -
14 Sobic.002G019000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
15 Sobic.005G066500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
17 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
18 Sobic.006G108300 expressed protein -
19 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
20 Sobic.008G084900 D-mannose binding lectin family protein, expressed -


Gene co-expression network
sample Sobic001G506700 Sobic001G506700 Sobic002G411000 Sobic002G411000 Sobic001G506700--Sobic002G411000 Sobic005G065700 Sobic005G065700 Sobic001G506700--Sobic005G065700 Sobic002G019100 Sobic002G019100 Sobic001G506700--Sobic002G019100 Sobic005G071900 Sobic005G071900 Sobic001G506700--Sobic005G071900 Sobic001G506600 Sobic001G506600 Sobic001G506700--Sobic001G506600 Sobic006G209000 Sobic006G209000 Sobic001G506700--Sobic006G209000 Sobic006G009700 Sobic006G009700 Sobic001G506700--Sobic006G009700 Sobic005G066300 Sobic005G066300 Sobic001G506700--Sobic005G066300 Sobic001G503000 Sobic001G503000 Sobic001G506700--Sobic001G503000 Sobic002G411000--Sobic005G066300 Sobic006G108300 Sobic006G108300 Sobic002G411000--Sobic006G108300 Sobic004G312500 Sobic004G312500 Sobic002G411000--Sobic004G312500 Sobic002G411000--Sobic005G071900 Sobic002G411000--Sobic006G009700 Sobic005G066500 Sobic005G066500 Sobic002G411000--Sobic005G066500 Sobic002G411000--Sobic001G506700 Sobic002G411000--Sobic001G506600 Sobic010G274400 Sobic010G274400 Sobic002G411000--Sobic010G274400 Sobic002G019000 Sobic002G019000 Sobic005G065700--Sobic002G019000 Sobic005G065700--Sobic005G071900 Sobic005G182900 Sobic005G182900 Sobic005G065700--Sobic005G182900 Sobic005G065700--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G065700--Sobic005G110511 Sobic010G213600 Sobic010G213600 Sobic005G065700--Sobic010G213600 Sobic003G079100 Sobic003G079100 Sobic005G065700--Sobic003G079100 Sobic008G033100 Sobic008G033100 Sobic005G065700--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G065700--Sobic010G242800 Sobic002G019100--Sobic006G009700 Sobic005G104200 Sobic005G104200 Sobic002G019100--Sobic005G104200 Sobic009G060700 Sobic009G060700 Sobic002G019100--Sobic009G060700 Sobic002G019100--Sobic006G108300 Sobic008G138700 Sobic008G138700 Sobic002G019100--Sobic008G138700 Sobic008G084900 Sobic008G084900 Sobic002G019100--Sobic008G084900 Sobic002G019100--Sobic001G506600 Sobic002G019100--Sobic001G506700 Sobic002G029600 Sobic002G029600 Sobic002G019100--Sobic002G029600 Sobic005G071900--Sobic005G065700 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G071900--Sobic005G110511 Sobic005G071900--Sobic006G108300 Sobic005G071900--Sobic006G009700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic005G071900--Sobic002G029600 Sobic010G096700 Sobic010G096700 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic001G506600--Sobic002G029600 Sobic001G506600--Sobic002G411000 Sobic001G506600--Sobic002G019100 Sobic004G322000 Sobic004G322000 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic003G215300 Sobic003G215300 Sobic001G506600--Sobic003G215300 Sobic007G154100 Sobic007G154100 Sobic006G209000--Sobic007G154100 Sobic006G209000--Sobic006G108300 Sobic006G209000--Sobic005G071900 Sobic006G209000--Sobic004G312500 Sobic006G209000--Sobic001G503000 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic009G106100 Sobic009G106100 Sobic006G209000--Sobic009G106100 Sobic006G009700--Sobic008G138700 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G009700--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic006G009700--Sobic001G238500 Sobic006G009700--Sobic005G066500 Sobic002G238700 Sobic002G238700 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300 Sobic005G066300--Sobic002G411000 Sobic005G066300--Sobic004G312500 Sobic005G066300--Sobic001G506700 Sobic005G066300--Sobic005G071900 Sobic005G066300--Sobic010G096700 Sobic005G197350 Sobic005G197350 Sobic005G066300--Sobic005G197350 Sobic005G066300--Sobic006G209000 Sobic002G081850 Sobic002G081850 Sobic005G066300--Sobic002G081850 Sobic005G066300--Sobic005G066500 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic001G503000--Sobic004G322000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.