Gene annotation
Transcriptome id Sobic.008G084900.1
Synonym Sb08g008420
Functional annotation D-mannose binding lectin family protein, expressed
UniProt C5YU14
Pfam PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF56
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G19130 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os11g03880.1 : D-mannose binding lectin family protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK06744
Barley HORVU4Hr1G026230.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
2 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
4 Sobic.002G238700 - -
5 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
6 Sobic.006G009700 expressed protein -
7 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
8 Sobic.002G115600 membrane protein, putative, expressed -
9 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.003G046700 expressed protein -
11 Sobic.005G175900 expressed protein -
12 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.005G120900 expressed protein -
14 Sobic.006G196400 U-box, putative, expressed -
15 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
16 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.005G226350 - -
18 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
19 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G084900 Sobic008G084900 Sobic005G216500 Sobic005G216500 Sobic008G084900--Sobic005G216500 Sobic004G008600 Sobic004G008600 Sobic008G084900--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic008G084900--Sobic010G269000 Sobic002G238700 Sobic002G238700 Sobic008G084900--Sobic002G238700 Sobic002G019100 Sobic002G019100 Sobic008G084900--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic008G084900--Sobic006G009700 Sobic005G134200 Sobic005G134200 Sobic008G084900--Sobic005G134200 Sobic002G115600 Sobic002G115600 Sobic008G084900--Sobic002G115600 Sobic002G003400 Sobic002G003400 Sobic008G084900--Sobic002G003400 Sobic005G216500--Sobic004G008600 Sobic005G216500--Sobic010G269000 Sobic003G046700 Sobic003G046700 Sobic005G216500--Sobic003G046700 Sobic005G216500--Sobic005G134200 Sobic005G216500--Sobic008G084900 Sobic007G220400 Sobic007G220400 Sobic005G216500--Sobic007G220400 Sobic005G216500--Sobic002G115600 Sobic007G094100 Sobic007G094100 Sobic005G216500--Sobic007G094100 Sobic010G115000 Sobic010G115000 Sobic005G216500--Sobic010G115000 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic005G120900 Sobic005G120900 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic010G269000--Sobic004G008600 Sobic010G269000--Sobic005G134200 Sobic010G269000--Sobic003G046700 Sobic010G269000--Sobic005G120900 Sobic010G269000--Sobic005G216500 Sobic010G269000--Sobic005G226350 Sobic010G269000--Sobic007G220400 Sobic010G269000--Sobic005G226400 Sobic010G241900 Sobic010G241900 Sobic010G269000--Sobic010G241900 Sobic002G238700--Sobic006G009700 Sobic001G238500 Sobic001G238500 Sobic002G238700--Sobic001G238500 Sobic005G066500 Sobic005G066500 Sobic002G238700--Sobic005G066500 Sobic002G238700--Sobic008G084900 Sobic004G126500 Sobic004G126500 Sobic002G238700--Sobic004G126500 Sobic005G065700 Sobic005G065700 Sobic002G238700--Sobic005G065700 Sobic005G071900 Sobic005G071900 Sobic002G238700--Sobic005G071900 Sobic008G138700 Sobic008G138700 Sobic002G238700--Sobic008G138700 Sobic005G104200 Sobic005G104200 Sobic002G238700--Sobic005G104200 Sobic002G019100--Sobic006G009700 Sobic002G019100--Sobic005G104200 Sobic009G060700 Sobic009G060700 Sobic002G019100--Sobic009G060700 Sobic006G108300 Sobic006G108300 Sobic002G019100--Sobic006G108300 Sobic002G019100--Sobic008G138700 Sobic002G019100--Sobic008G084900 Sobic001G506600 Sobic001G506600 Sobic002G019100--Sobic001G506600 Sobic001G506700 Sobic001G506700 Sobic002G019100--Sobic001G506700 Sobic002G029600 Sobic002G029600 Sobic002G019100--Sobic002G029600 Sobic006G009700--Sobic008G138700 Sobic004G312500 Sobic004G312500 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic006G009700--Sobic004G126500 Sobic006G009700--Sobic001G238500 Sobic006G009700--Sobic005G066500 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300 Sobic005G134200--Sobic010G269000 Sobic005G134200--Sobic004G008600 Sobic005G134200--Sobic005G226400 Sobic002G391300 Sobic002G391300 Sobic005G134200--Sobic002G391300 Sobic005G134200--Sobic010G191700 Sobic005G134200--Sobic010G241900 Sobic010G128300 Sobic010G128300 Sobic005G134200--Sobic010G128300 Sobic005G134200--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G134200--Sobic006G047200 Sobic003G215300 Sobic003G215300 Sobic002G115600--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic002G115600--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic002G115600--Sobic001G263300 Sobic007G090600 Sobic007G090600 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G118900 Sobic002G118900 Sobic002G115600--Sobic002G118900 Sobic006G205700 Sobic006G205700 Sobic002G115600--Sobic006G205700 Sobic005G175900 Sobic005G175900 Sobic002G115600--Sobic005G175900 Sobic002G003400--Sobic005G175900 Sobic001G232000 Sobic001G232000 Sobic002G003400--Sobic001G232000 Sobic002G003400--Sobic006G196400 Sobic002G003400--Sobic002G115600 Sobic002G003400--Sobic007G090600 Sobic002G003400--Sobic009G060700 Sobic002G003400--Sobic001G263300 Sobic002G003400--Sobic004G008600 Sobic002G003400--Sobic002G118900
Octagon: transcription factors


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