Gene annotation
Transcriptome id Sobic.002G115600.1
Synonym Sb02g009840
Functional annotation membrane protein, putative, expressed
UniProt C5X4D2
Pfam PF01925
Panther DB PTHR14255 PTHR14255:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G61740 : Sulfite exporter TauE/SafE family protein
RAP-DB (Rice) LOC_Os01g57700.1 : membrane protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK10116 , KQK10115 , PNT73014
Barley HORVU3Hr1G077570.1 , HORVU7Hr1G012180.3 , HORVU7Hr1G012180.2 , HORVU7Hr1G012180.1
Wheat TraesCS7A02G064300 , TraesCS3A02G324800 , TraesCS7D02G059100 , TraesCS3D02G318100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
2 Sobic.006G196400 U-box, putative, expressed -
3 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
4 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
5 Sobic.005G052700 ZOS11-01 - C2H2 zinc finger protein, expressed -
6 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
8 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
9 Sobic.005G175900 expressed protein -
10 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
11 Sobic.003G240400 leaf senescence related protein, putative, expressed -
12 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
13 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
14 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
15 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
16 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
17 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
19 Sobic.010G191700 cytochrome P450, putative, expressed -
20 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -


Gene co-expression network
sample Sobic002G115600 Sobic002G115600 Sobic003G215300 Sobic003G215300 Sobic002G115600--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic002G115600--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic002G115600--Sobic001G263300 Sobic007G090600 Sobic007G090600 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G118900 Sobic002G118900 Sobic002G115600--Sobic002G118900 Sobic006G205700 Sobic006G205700 Sobic002G115600--Sobic006G205700 Sobic005G175900 Sobic005G175900 Sobic002G115600--Sobic005G175900 Sobic003G215300--Sobic007G090600 Sobic006G031100 Sobic006G031100 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic005G080600 Sobic005G080600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic006G196400--Sobic002G115600 Sobic006G196400--Sobic005G175900 Sobic010G082000 Sobic010G082000 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700 Sobic001G263300--Sobic003G240400 Sobic001G263300--Sobic005G175900 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic001G263300--Sobic007G090600 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic001G263300--Sobic006G031100 Sobic004G322000 Sobic004G322000 Sobic001G263300--Sobic004G322000 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic004G014600 Sobic004G014600 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic007G090600--Sobic002G115600 Sobic005G052700--Sobic002G115600 Sobic005G052700--Sobic007G090600 Sobic005G052700--Sobic003G215300 Sobic005G052700--Sobic002G391400 Sobic010G241900 Sobic010G241900 Sobic005G052700--Sobic010G241900 Sobic005G052700--Sobic006G205700 Sobic005G052700--Sobic004G014600 Sobic009G058400 Sobic009G058400 Sobic005G052700--Sobic009G058400 Sobic005G216500 Sobic005G216500 Sobic005G052700--Sobic005G216500 Sobic007G206800 Sobic007G206800 Sobic002G391400--Sobic007G206800 Sobic002G391400--Sobic010G241900 Sobic002G391400--Sobic006G205700 Sobic010G191700 Sobic010G191700 Sobic002G391400--Sobic010G191700 Sobic007G220400 Sobic007G220400 Sobic002G391400--Sobic007G220400 Sobic002G334000 Sobic002G334000 Sobic002G391400--Sobic002G334000 Sobic002G392100 Sobic002G392100 Sobic002G391400--Sobic002G392100 Sobic002G111900 Sobic002G111900 Sobic002G391400--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic002G391400--Sobic010G191600 Sobic003G269900 Sobic003G269900 Sobic002G118900--Sobic003G269900 Sobic002G118900--Sobic002G115600 Sobic002G118900--Sobic001G263300 Sobic002G118900--Sobic005G216500 Sobic002G003400 Sobic002G003400 Sobic002G118900--Sobic002G003400 Sobic002G118900--Sobic006G196400 Sobic009G032900 Sobic009G032900 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic002G118900--Sobic005G080600 Sobic006G205700--Sobic002G391400 Sobic003G441800 Sobic003G441800 Sobic006G205700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic006G205700--Sobic007G206800 Sobic003G441601 Sobic003G441601 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic005G175900--Sobic001G263300 Sobic005G175900--Sobic006G196400 Sobic005G175900--Sobic002G115600 Sobic005G175900--Sobic003G215300 Sobic005G175900--Sobic007G090600 Sobic005G175900--Sobic006G031100 Sobic005G175900--Sobic002G003400 Sobic005G175900--Sobic010G082000 Sobic005G175900--Sobic003G240400
Octagon: transcription factors


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