Gene annotation
Transcriptome id Sobic.002G118900.3,Sobic.002G118900.5,Sobic.002G118900.6,Sobic.002G118900.4
Synonym Sb02g010130
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt A0A1B6QAS0
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF50
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G64700 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os12g33300.1 : integral membrane protein DUF6 containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
2 Sobic.002G115600 membrane protein, putative, expressed -
3 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
4 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
5 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G196400 U-box, putative, expressed -
7 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.003G046700 expressed protein -
9 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
10 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
12 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
13 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
14 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
15 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
16 Sobic.005G079100 dirigent, putative -
17 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
18 Sobic.003G240400 leaf senescence related protein, putative, expressed -
19 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.005G052700 ZOS11-01 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic002G118900 Sobic002G118900 Sobic003G269900 Sobic003G269900 Sobic002G118900--Sobic003G269900 Sobic002G115600 Sobic002G115600 Sobic002G118900--Sobic002G115600 Sobic001G263300 Sobic001G263300 Sobic002G118900--Sobic001G263300 Sobic005G216500 Sobic005G216500 Sobic002G118900--Sobic005G216500 Sobic002G003400 Sobic002G003400 Sobic002G118900--Sobic002G003400 Sobic006G196400 Sobic006G196400 Sobic002G118900--Sobic006G196400 Sobic009G032900 Sobic009G032900 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic005G080600 Sobic005G080600 Sobic002G118900--Sobic005G080600 Sobic003G269900--Sobic002G118900 Sobic010G115000 Sobic010G115000 Sobic003G269900--Sobic010G115000 Sobic010G139100 Sobic010G139100 Sobic003G269900--Sobic010G139100 Sobic003G269900--Sobic009G032900 Sobic003G269900--Sobic005G216500 Sobic003G269900--Sobic002G115600 Sobic010G158400 Sobic010G158400 Sobic003G269900--Sobic010G158400 Sobic005G216700 Sobic005G216700 Sobic003G269900--Sobic005G216700 Sobic003G185300 Sobic003G185300 Sobic003G269900--Sobic003G185300 Sobic003G215300 Sobic003G215300 Sobic002G115600--Sobic003G215300 Sobic002G115600--Sobic006G196400 Sobic002G115600--Sobic001G263300 Sobic007G090600 Sobic007G090600 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G115600--Sobic002G118900 Sobic006G205700 Sobic006G205700 Sobic002G115600--Sobic006G205700 Sobic005G175900 Sobic005G175900 Sobic002G115600--Sobic005G175900 Sobic003G240400 Sobic003G240400 Sobic001G263300--Sobic003G240400 Sobic001G263300--Sobic005G175900 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic001G263300--Sobic007G090600 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic006G031100 Sobic006G031100 Sobic001G263300--Sobic006G031100 Sobic004G322000 Sobic004G322000 Sobic001G263300--Sobic004G322000 Sobic004G008600 Sobic004G008600 Sobic005G216500--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic005G216500--Sobic010G269000 Sobic005G216500--Sobic003G046700 Sobic005G134200 Sobic005G134200 Sobic005G216500--Sobic005G134200 Sobic008G084900 Sobic008G084900 Sobic005G216500--Sobic008G084900 Sobic007G220400 Sobic007G220400 Sobic005G216500--Sobic007G220400 Sobic005G216500--Sobic002G115600 Sobic007G094100 Sobic007G094100 Sobic005G216500--Sobic007G094100 Sobic005G216500--Sobic010G115000 Sobic002G003400--Sobic005G175900 Sobic001G232000 Sobic001G232000 Sobic002G003400--Sobic001G232000 Sobic002G003400--Sobic006G196400 Sobic002G003400--Sobic002G115600 Sobic002G003400--Sobic007G090600 Sobic009G060700 Sobic009G060700 Sobic002G003400--Sobic009G060700 Sobic002G003400--Sobic001G263300 Sobic002G003400--Sobic004G008600 Sobic002G003400--Sobic002G118900 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic006G196400--Sobic002G115600 Sobic006G196400--Sobic005G175900 Sobic010G082000 Sobic010G082000 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700 Sobic002G068000 Sobic002G068000 Sobic009G032900--Sobic002G068000 Sobic004G351200 Sobic004G351200 Sobic009G032900--Sobic004G351200 Sobic009G032900--Sobic005G216700 Sobic009G032900--Sobic010G158400 Sobic002G334000 Sobic002G334000 Sobic009G032900--Sobic002G334000 Sobic009G032900--Sobic010G139100 Sobic007G206800 Sobic007G206800 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic009G032900--Sobic003G269900 Sobic003G046700--Sobic002G334000 Sobic003G046700--Sobic010G269000 Sobic003G046700--Sobic004G008600 Sobic003G046700--Sobic005G216500 Sobic005G226350 Sobic005G226350 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic010G191700 Sobic010G191700 Sobic003G046700--Sobic010G191700 Sobic009G018300 Sobic009G018300 Sobic003G046700--Sobic009G018300 Sobic010G241900 Sobic010G241900 Sobic003G046700--Sobic010G241900 Sobic005G080600--Sobic007G206800 Sobic005G080600--Sobic006G196400 Sobic005G080600--Sobic007G220400 Sobic005G080600--Sobic002G391400 Sobic009G259800 Sobic009G259800 Sobic005G080600--Sobic009G259800 Sobic004G119800 Sobic004G119800 Sobic005G080600--Sobic004G119800 Sobic005G080600--Sobic002G334000 Sobic005G080600--Sobic002G068000 Sobic005G080600--Sobic010G241900
Octagon: transcription factors


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