Gene annotation
Transcriptome id Sobic.003G269900.1
Synonym SBT5.4, Sb03g032240, ATSBT5.4
Functional annotation OsSub12 - Putative Subtilisin homologue, expressed
UniProt A0A1B6Q5K5
Pfam PF02225 PF00082
Panther DB PTHR10795 PTHR10795:SF382
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G59810 : Subtilase family protein
RAP-DB (Rice) LOC_Os02g10520.1 : OsSub12 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a027887
Brachypodium PNT65939 , PNT65940
Barley HORVU2Hr1G005550.4 , HORVU2Hr1G005550.1 , HORVU2Hr1G005550.3 , HORVU2Hr1G005550.2 , HORVU2Hr1G005560.1 , HORVU2Hr1G005560.2 , HORVU2Hr1G005560.3 , HORVU2Hr1G005560.4
Wheat TraesCS5B02G255200 , TraesCS3A02G254900 , TraesCS2D02G036500 , TraesCS3D02G255800 , TraesCS2D02G036400 , TraesCS2B02G050800 , TraesCS2A02G037100 , TraesCS2A02G037100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
2 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
3 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
4 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
6 Sobic.002G115600 membrane protein, putative, expressed -
7 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
9 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
10 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
11 Sobic.003G046700 expressed protein -
12 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.005G079100 dirigent, putative -
14 Sobic.002G068000 expressed protein -
15 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
16 Sobic.006G171300 expansin precursor, putative, expressed -
17 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
18 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
19 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G269900 Sobic003G269900 Sobic002G118900 Sobic002G118900 Sobic003G269900--Sobic002G118900 Sobic010G115000 Sobic010G115000 Sobic003G269900--Sobic010G115000 Sobic010G139100 Sobic010G139100 Sobic003G269900--Sobic010G139100 Sobic009G032900 Sobic009G032900 Sobic003G269900--Sobic009G032900 Sobic005G216500 Sobic005G216500 Sobic003G269900--Sobic005G216500 Sobic002G115600 Sobic002G115600 Sobic003G269900--Sobic002G115600 Sobic010G158400 Sobic010G158400 Sobic003G269900--Sobic010G158400 Sobic005G216700 Sobic005G216700 Sobic003G269900--Sobic005G216700 Sobic003G185300 Sobic003G185300 Sobic003G269900--Sobic003G185300 Sobic002G118900--Sobic003G269900 Sobic002G118900--Sobic002G115600 Sobic001G263300 Sobic001G263300 Sobic002G118900--Sobic001G263300 Sobic002G118900--Sobic005G216500 Sobic002G003400 Sobic002G003400 Sobic002G118900--Sobic002G003400 Sobic006G196400 Sobic006G196400 Sobic002G118900--Sobic006G196400 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic005G080600 Sobic005G080600 Sobic002G118900--Sobic005G080600 Sobic007G094100 Sobic007G094100 Sobic010G115000--Sobic007G094100 Sobic010G115000--Sobic003G269900 Sobic010G115000--Sobic005G216500 Sobic010G115000--Sobic003G046700 Sobic004G008600 Sobic004G008600 Sobic010G115000--Sobic004G008600 Sobic006G171300 Sobic006G171300 Sobic010G115000--Sobic006G171300 Sobic010G115000--Sobic010G139100 Sobic010G269000 Sobic010G269000 Sobic010G115000--Sobic010G269000 Sobic008G084900 Sobic008G084900 Sobic010G115000--Sobic008G084900 Sobic010G139100--Sobic009G032900 Sobic004G351200 Sobic004G351200 Sobic010G139100--Sobic004G351200 Sobic010G139100--Sobic003G269900 Sobic010G139100--Sobic005G216700 Sobic006G135500 Sobic006G135500 Sobic010G139100--Sobic006G135500 Sobic004G323000 Sobic004G323000 Sobic010G139100--Sobic004G323000 Sobic010G139100--Sobic010G115000 Sobic010G174100 Sobic010G174100 Sobic010G139100--Sobic010G174100 Sobic010G139100--Sobic010G158400 Sobic002G068000 Sobic002G068000 Sobic009G032900--Sobic002G068000 Sobic009G032900--Sobic004G351200 Sobic009G032900--Sobic005G216700 Sobic009G032900--Sobic010G158400 Sobic002G334000 Sobic002G334000 Sobic009G032900--Sobic002G334000 Sobic009G032900--Sobic010G139100 Sobic007G206800 Sobic007G206800 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic009G032900--Sobic003G269900 Sobic005G216500--Sobic004G008600 Sobic005G216500--Sobic010G269000 Sobic005G216500--Sobic003G046700 Sobic005G134200 Sobic005G134200 Sobic005G216500--Sobic005G134200 Sobic005G216500--Sobic008G084900 Sobic007G220400 Sobic007G220400 Sobic005G216500--Sobic007G220400 Sobic005G216500--Sobic002G115600 Sobic005G216500--Sobic007G094100 Sobic005G216500--Sobic010G115000 Sobic003G215300 Sobic003G215300 Sobic002G115600--Sobic003G215300 Sobic002G115600--Sobic006G196400 Sobic002G115600--Sobic001G263300 Sobic007G090600 Sobic007G090600 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G115600--Sobic002G118900 Sobic006G205700 Sobic006G205700 Sobic002G115600--Sobic006G205700 Sobic005G175900 Sobic005G175900 Sobic002G115600--Sobic005G175900 Sobic010G158400--Sobic002G068000 Sobic010G158400--Sobic009G032900 Sobic003G426500 Sobic003G426500 Sobic010G158400--Sobic003G426500 Sobic003G349400 Sobic003G349400 Sobic010G158400--Sobic003G349400 Sobic010G158400--Sobic004G351200 Sobic010G158400--Sobic003G185300 Sobic010G158400--Sobic005G216700 Sobic009G259800 Sobic009G259800 Sobic010G158400--Sobic009G259800 Sobic006G150100 Sobic006G150100 Sobic010G158400--Sobic006G150100 Sobic005G216700--Sobic004G351200 Sobic005G216700--Sobic009G032900 Sobic005G216700--Sobic010G139100 Sobic005G216700--Sobic002G068000 Sobic005G216700--Sobic002G334000 Sobic005G216700--Sobic007G206800 Sobic005G216700--Sobic010G158400 Sobic005G216700--Sobic005G080600 Sobic005G216700--Sobic003G046700 Sobic003G185300--Sobic009G259800 Sobic003G185300--Sobic002G068000 Sobic003G185300--Sobic009G032900 Sobic003G185300--Sobic010G158400 Sobic003G185300--Sobic005G080600 Sobic003G185300--Sobic003G426500 Sobic003G185300--Sobic005G216500 Sobic003G185300--Sobic003G269900 Sobic005G115300 Sobic005G115300 Sobic003G185300--Sobic005G115300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.