Gene annotation
Transcriptome id Sobic.006G171300.1
Synonym EXPB2, ATHEXPBETA1.4, Sb06g024660, ATEXPB2
Functional annotation expansin precursor, putative, expressed
UniProt C5YDI1
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os04g46650.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a007281 , Zm00025a056861 , Zm00025a020872
Brachypodium KQJ83951
Barley HORVU2Hr1G097490.5 , HORVU2Hr1G097490.4 , HORVU2Hr1G097490.3 , HORVU2Hr1G097490.2 , HORVU2Hr1G097490.1
Wheat TraesCS2A02G413500 , TraesCS2B02G607400 , TraesCS2D02G592900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.010G174100 expressed protein -
3 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
4 Sobic.009G096300 ATOFP17/OFP17, putative, expressed -
5 Sobic.004G009300 expressed protein -
6 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
7 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
8 Sobic.002G392300 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G323000 SCP-like extracellular protein, expressed -
11 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
12 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
13 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
14 Sobic.002G392200 peroxidase precursor, putative, expressed -
15 Sobic.007G149000 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cytochrome P450, putative, expressed -
16 Sobic.003G046700 expressed protein -
17 Sobic.001G301400 expansin precursor, putative, expressed -
18 Sobic.003G385900 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
19 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type


Gene co-expression network
sample Sobic006G171300 Sobic006G171300 Sobic007G094100 Sobic007G094100 Sobic006G171300--Sobic007G094100 Sobic010G174100 Sobic010G174100 Sobic006G171300--Sobic010G174100 Sobic010G115000 Sobic010G115000 Sobic006G171300--Sobic010G115000 Sobic009G096300 Sobic009G096300 Sobic006G171300--Sobic009G096300 Sobic004G009300 Sobic004G009300 Sobic006G171300--Sobic004G009300 Sobic003G269900 Sobic003G269900 Sobic006G171300--Sobic003G269900 Sobic010G139100 Sobic010G139100 Sobic006G171300--Sobic010G139100 Sobic002G392300 Sobic002G392300 Sobic006G171300--Sobic002G392300 Sobic002G391200 Sobic002G391200 Sobic006G171300--Sobic002G391200 Sobic007G094100--Sobic010G115000 Sobic005G216500 Sobic005G216500 Sobic007G094100--Sobic005G216500 Sobic004G008600 Sobic004G008600 Sobic007G094100--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic007G094100--Sobic010G269000 Sobic007G094100--Sobic004G009300 Sobic003G046700 Sobic003G046700 Sobic007G094100--Sobic003G046700 Sobic007G094100--Sobic006G171300 Sobic009G018300 Sobic009G018300 Sobic007G094100--Sobic009G018300 Sobic005G120900 Sobic005G120900 Sobic007G094100--Sobic005G120900 Sobic010G174100--Sobic009G096300 Sobic004G323000 Sobic004G323000 Sobic010G174100--Sobic004G323000 Sobic010G174100--Sobic006G171300 Sobic010G174100--Sobic002G391200 Sobic010G174100--Sobic010G139100 Sobic001G301400 Sobic001G301400 Sobic010G174100--Sobic001G301400 Sobic010G021700 Sobic010G021700 Sobic010G174100--Sobic010G021700 Sobic010G174100--Sobic010G115000 Sobic005G161200 Sobic005G161200 Sobic010G174100--Sobic005G161200 Sobic010G115000--Sobic007G094100 Sobic010G115000--Sobic003G269900 Sobic010G115000--Sobic005G216500 Sobic010G115000--Sobic003G046700 Sobic010G115000--Sobic004G008600 Sobic010G115000--Sobic006G171300 Sobic010G115000--Sobic010G139100 Sobic010G115000--Sobic010G269000 Sobic008G084900 Sobic008G084900 Sobic010G115000--Sobic008G084900 Sobic009G096300--Sobic010G174100 Sobic009G096300--Sobic002G391200 Sobic009G096300--Sobic006G171300 Sobic009G096300--Sobic001G301400 Sobic009G096300--Sobic010G021700 Sobic009G096300--Sobic004G323000 Sobic002G307900 Sobic002G307900 Sobic009G096300--Sobic002G307900 Sobic009G096300--Sobic010G115000 Sobic002G082700 Sobic002G082700 Sobic009G096300--Sobic002G082700 Sobic004G009300--Sobic009G018300 Sobic004G009300--Sobic002G392300 Sobic004G009300--Sobic007G094100 Sobic004G337950 Sobic004G337950 Sobic004G009300--Sobic004G337950 Sobic006G135500 Sobic006G135500 Sobic004G009300--Sobic006G135500 Sobic004G009300--Sobic003G046700 Sobic004G119900 Sobic004G119900 Sobic004G009300--Sobic004G119900 Sobic001G233100 Sobic001G233100 Sobic004G009300--Sobic001G233100 Sobic001G521600 Sobic001G521600 Sobic004G009300--Sobic001G521600 Sobic002G118900 Sobic002G118900 Sobic003G269900--Sobic002G118900 Sobic003G269900--Sobic010G115000 Sobic003G269900--Sobic010G139100 Sobic009G032900 Sobic009G032900 Sobic003G269900--Sobic009G032900 Sobic003G269900--Sobic005G216500 Sobic002G115600 Sobic002G115600 Sobic003G269900--Sobic002G115600 Sobic010G158400 Sobic010G158400 Sobic003G269900--Sobic010G158400 Sobic005G216700 Sobic005G216700 Sobic003G269900--Sobic005G216700 Sobic003G185300 Sobic003G185300 Sobic003G269900--Sobic003G185300 Sobic010G139100--Sobic009G032900 Sobic004G351200 Sobic004G351200 Sobic010G139100--Sobic004G351200 Sobic010G139100--Sobic003G269900 Sobic010G139100--Sobic005G216700 Sobic010G139100--Sobic006G135500 Sobic010G139100--Sobic004G323000 Sobic010G139100--Sobic010G115000 Sobic010G139100--Sobic010G174100 Sobic010G139100--Sobic010G158400 Sobic002G392200 Sobic002G392200 Sobic002G392300--Sobic002G392200 Sobic002G392300--Sobic004G009300 Sobic002G392300--Sobic006G135500 Sobic003G425701 Sobic003G425701 Sobic002G392300--Sobic003G425701 Sobic002G392300--Sobic006G171300 Sobic002G392300--Sobic004G337950 Sobic002G392300--Sobic007G094100 Sobic002G392300--Sobic009G018300 Sobic006G178300 Sobic006G178300 Sobic002G392300--Sobic006G178300 Sobic002G391200--Sobic010G021700 Sobic002G391200--Sobic001G301400 Sobic002G391200--Sobic002G307900 Sobic002G391200--Sobic009G096300 Sobic001G464300 Sobic001G464300 Sobic002G391200--Sobic001G464300 Sobic002G391200--Sobic010G174100 Sobic002G391200--Sobic002G082700 Sobic002G391200--Sobic010G115000 Sobic002G391200--Sobic010G139100
Octagon: transcription factors


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