Gene annotation
Transcriptome id Sobic.004G323000.1
Synonym Sb04g035310
Functional annotation SCP-like extracellular protein, expressed
UniProt C5XU93
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF241
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57625 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os02g54540.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a022389
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G174100 expressed protein -
2 Sobic.005G161200 ent-kaurene synthase, chloroplast precursor, putative, expressed K04120: ent-copalyl diphosphate synthase
K14043: syn-copalyl-diphosphate synthase
3 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
4 Sobic.001G314100 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.009G096300 ATOFP17/OFP17, putative, expressed -
6 Sobic.001G301400 expansin precursor, putative, expressed -
7 Sobic.008G158266 - -
8 Sobic.010G021700 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G171300 expansin precursor, putative, expressed -
11 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
13 Sobic.010G006200 expansin precursor, putative, expressed -
14 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
15 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
16 Sobic.001G338900 cytochrome P450, putative, expressed -
17 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
18 Sobic.005G161600 terpene synthase, putative, expressed K04121: ent-kaurene synthase
19 Sobic.001G314600 expansin precursor, putative, expressed -
20 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic004G323000 Sobic004G323000 Sobic010G174100 Sobic010G174100 Sobic004G323000--Sobic010G174100 Sobic005G161200 Sobic005G161200 Sobic004G323000--Sobic005G161200 Sobic010G139100 Sobic010G139100 Sobic004G323000--Sobic010G139100 Sobic001G314100 Sobic001G314100 Sobic004G323000--Sobic001G314100 Sobic009G096300 Sobic009G096300 Sobic004G323000--Sobic009G096300 Sobic001G301400 Sobic001G301400 Sobic004G323000--Sobic001G301400 Sobic008G158266 Sobic008G158266 Sobic004G323000--Sobic008G158266 Sobic010G021700 Sobic010G021700 Sobic004G323000--Sobic010G021700 Sobic002G391200 Sobic002G391200 Sobic004G323000--Sobic002G391200 Sobic010G174100--Sobic009G096300 Sobic010G174100--Sobic004G323000 Sobic006G171300 Sobic006G171300 Sobic010G174100--Sobic006G171300 Sobic010G174100--Sobic002G391200 Sobic010G174100--Sobic010G139100 Sobic010G174100--Sobic001G301400 Sobic010G174100--Sobic010G021700 Sobic010G115000 Sobic010G115000 Sobic010G174100--Sobic010G115000 Sobic010G174100--Sobic005G161200 Sobic005G161200--Sobic004G323000 Sobic005G161600 Sobic005G161600 Sobic005G161200--Sobic005G161600 Sobic005G161200--Sobic010G174100 Sobic001G338900 Sobic001G338900 Sobic005G161200--Sobic001G338900 Sobic005G161200--Sobic008G158266 Sobic001G076850 Sobic001G076850 Sobic005G161200--Sobic001G076850 Sobic009G032900 Sobic009G032900 Sobic010G139100--Sobic009G032900 Sobic004G351200 Sobic004G351200 Sobic010G139100--Sobic004G351200 Sobic003G269900 Sobic003G269900 Sobic010G139100--Sobic003G269900 Sobic005G216700 Sobic005G216700 Sobic010G139100--Sobic005G216700 Sobic006G135500 Sobic006G135500 Sobic010G139100--Sobic006G135500 Sobic010G139100--Sobic004G323000 Sobic010G139100--Sobic010G115000 Sobic010G139100--Sobic010G174100 Sobic010G158400 Sobic010G158400 Sobic010G139100--Sobic010G158400 Sobic001G314100--Sobic001G338900 Sobic001G314100--Sobic001G301400 Sobic001G314100--Sobic004G323000 Sobic010G006200 Sobic010G006200 Sobic001G314100--Sobic010G006200 Sobic002G307900 Sobic002G307900 Sobic001G314100--Sobic002G307900 Sobic001G314100--Sobic010G021700 Sobic001G314100--Sobic002G391200 Sobic001G314100--Sobic010G174100 Sobic002G122400 Sobic002G122400 Sobic001G314100--Sobic002G122400 Sobic009G096300--Sobic010G174100 Sobic009G096300--Sobic002G391200 Sobic009G096300--Sobic006G171300 Sobic009G096300--Sobic001G301400 Sobic009G096300--Sobic010G021700 Sobic009G096300--Sobic004G323000 Sobic009G096300--Sobic002G307900 Sobic009G096300--Sobic010G115000 Sobic002G082700 Sobic002G082700 Sobic009G096300--Sobic002G082700 Sobic001G301400--Sobic010G021700 Sobic001G301400--Sobic002G307900 Sobic001G301400--Sobic002G391200 Sobic001G301400--Sobic001G314100 Sobic001G301400--Sobic009G096300 Sobic001G301400--Sobic010G174100 Sobic001G301400--Sobic004G323000 Sobic001G301400--Sobic010G139100 Sobic001G308600 Sobic001G308600 Sobic001G301400--Sobic001G308600 Sobic008G158266--Sobic004G323000 Sobic008G158266--Sobic010G139100 Sobic008G158266--Sobic006G135500 Sobic008G158266--Sobic002G122400 Sobic008G158266--Sobic005G161200 Sobic008G158266--Sobic001G314100 Sobic008G158266--Sobic010G174100 Sobic008G158266--Sobic010G006200 Sobic008G158266--Sobic009G032900 Sobic010G021700--Sobic001G301400 Sobic010G021700--Sobic002G307900 Sobic010G021700--Sobic002G391200 Sobic010G021700--Sobic009G096300 Sobic010G021700--Sobic010G174100 Sobic010G021700--Sobic010G139100 Sobic010G021700--Sobic001G314100 Sobic010G021700--Sobic001G308600 Sobic010G021700--Sobic004G323000 Sobic002G391200--Sobic010G021700 Sobic002G391200--Sobic001G301400 Sobic002G391200--Sobic002G307900 Sobic002G391200--Sobic009G096300 Sobic001G464300 Sobic001G464300 Sobic002G391200--Sobic001G464300 Sobic002G391200--Sobic010G174100 Sobic002G391200--Sobic002G082700 Sobic002G391200--Sobic010G115000 Sobic002G391200--Sobic010G139100
Octagon: transcription factors


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