Gene annotation
Transcriptome id Sobic.001G314100.1
Synonym Sb01g030540
Functional annotation peroxidase precursor, putative, expressed
UniProt C5WUE6
Pfam PF00141
Panther DB PTHR31235:SF50 PTHR31235
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0004601; peroxidase activity GO:0006979response to oxidative stress


Orthologs (automatic annotation)
TAIR AT5G17820 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os10g39160.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048553 , Zm00025a021632 , Zm00025a024242 , Zm00025a052254 , Zm00025a020001 , Zm00025a025893 , Zm00025a048923 , Zm00025a025691 , Zm00025a001459 , Zm00025a035874 , Zm00025a049143
Brachypodium KQJ86402 , KQK23931 , KQJ86398 , KQK21558 , KQK22705 , KQJ95997 , KQK18055 , KQK08234 , KQJ97596 , KQK14659
Barley HORVU0Hr1G002770.2 , HORVU0Hr1G002770.1 , HORVU4Hr1G084920.8 , HORVU4Hr1G084920.1 , HORVU2Hr1G026370.2 , HORVU2Hr1G026370.1 , HORVU4Hr1G084920.9 , HORVU4Hr1G084920.3 , HORVU4Hr1G084920.2 , HORVU4Hr1G084920.5 , HORVU4Hr1G084920.4 , HORVU4Hr1G084920.7 , HORVU4Hr1G084920.6 , HORVU1Hr1G016770.10 , HORVU1Hr1G016770.11 , HORVU4Hr1G064960.2 , HORVU4Hr1G064960.1 , HORVU7Hr1G089310.2 , HORVU1Hr1G016770.8 , HORVU1Hr1G016770.1
Wheat TraesCS1B02G115900 , TraesCS1B02G096200 , TraesCS1A02G200100 , TraesCS1D02G080300 , TraesCS5A02G323200 , TraesCS5D02G330300 , TraesCS2D02G152400 , TraesCS4B02G232700 , TraesCS4D02G233900 , TraesCS5A02G516300 , TraesCS2B02G173000 , TraesCS4A02G076600 , TraesCS4B02G347700 , TraesCS4A02G389000 , TraesCS2D02G153400 , TraesCS2D02G153400 , TraesCS1D02G096400 , TraesCS2D02G153300 , TraesCS1A02G078100 , TraesCS2A02G148300 , TraesCS7A02G353000 , TraesCS5B02G323700 , TraesCS1B02G214800 , TraesCS4D02G342600 , TraesCS1A02G200200 , TraesCS2D02G153200 , TraesCS2D02G153200 , TraesCS3A02G378900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G338900 cytochrome P450, putative, expressed -
2 Sobic.001G301400 expansin precursor, putative, expressed -
3 Sobic.004G323000 SCP-like extracellular protein, expressed -
4 Sobic.010G006200 expansin precursor, putative, expressed -
5 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.010G021700 eukaryotic aspartyl protease domain containing protein, expressed -
7 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.010G174100 expressed protein -
9 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
10 Sobic.009G096300 ATOFP17/OFP17, putative, expressed -
11 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
12 Sobic.008G158266 - -
13 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
14 Sobic.005G161200 ent-kaurene synthase, chloroplast precursor, putative, expressed K04120: ent-copalyl diphosphate synthase
K14043: syn-copalyl-diphosphate synthase
15 Sobic.010G146300 DEFL9 - Defensin and Defensin-like DEFL family, expressed K08235: xyloglucan:xyloglucosyl transferase
16 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.001G314600 expansin precursor, putative, expressed -
18 Sobic.003G059000 POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
19 Sobic.005G161600 terpene synthase, putative, expressed K04121: ent-kaurene synthase
20 Sobic.001G293000 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G314100 Sobic001G314100 Sobic001G338900 Sobic001G338900 Sobic001G314100--Sobic001G338900 Sobic001G301400 Sobic001G301400 Sobic001G314100--Sobic001G301400 Sobic004G323000 Sobic004G323000 Sobic001G314100--Sobic004G323000 Sobic010G006200 Sobic010G006200 Sobic001G314100--Sobic010G006200 Sobic002G307900 Sobic002G307900 Sobic001G314100--Sobic002G307900 Sobic010G021700 Sobic010G021700 Sobic001G314100--Sobic010G021700 Sobic002G391200 Sobic002G391200 Sobic001G314100--Sobic002G391200 Sobic010G174100 Sobic010G174100 Sobic001G314100--Sobic010G174100 Sobic002G122400 Sobic002G122400 Sobic001G314100--Sobic002G122400 Sobic001G338900--Sobic001G314100 Sobic001G338900--Sobic010G006200 Sobic005G161200 Sobic005G161200 Sobic001G338900--Sobic005G161200 Sobic001G338900--Sobic004G323000 Sobic001G314600 Sobic001G314600 Sobic001G338900--Sobic001G314600 Sobic001G338900--Sobic001G301400 Sobic003G059000 Sobic003G059000 Sobic001G338900--Sobic003G059000 Sobic001G338900--Sobic002G122400 Sobic001G338900--Sobic010G174100 Sobic001G301400--Sobic010G021700 Sobic001G301400--Sobic002G307900 Sobic001G301400--Sobic002G391200 Sobic001G301400--Sobic001G314100 Sobic009G096300 Sobic009G096300 Sobic001G301400--Sobic009G096300 Sobic001G301400--Sobic010G174100 Sobic001G301400--Sobic004G323000 Sobic010G139100 Sobic010G139100 Sobic001G301400--Sobic010G139100 Sobic001G308600 Sobic001G308600 Sobic001G301400--Sobic001G308600 Sobic004G323000--Sobic010G174100 Sobic004G323000--Sobic005G161200 Sobic004G323000--Sobic010G139100 Sobic004G323000--Sobic001G314100 Sobic004G323000--Sobic009G096300 Sobic004G323000--Sobic001G301400 Sobic008G158266 Sobic008G158266 Sobic004G323000--Sobic008G158266 Sobic004G323000--Sobic010G021700 Sobic004G323000--Sobic002G391200 Sobic010G146300 Sobic010G146300 Sobic010G006200--Sobic010G146300 Sobic002G412600 Sobic002G412600 Sobic010G006200--Sobic002G412600 Sobic010G006200--Sobic002G122400 Sobic010G006200--Sobic001G338900 Sobic010G006200--Sobic001G314100 Sobic001G293000 Sobic001G293000 Sobic010G006200--Sobic001G293000 Sobic004G106000 Sobic004G106000 Sobic010G006200--Sobic004G106000 Sobic010G006200--Sobic001G314600 Sobic010G006200--Sobic002G307900 Sobic002G307900--Sobic001G301400 Sobic002G307900--Sobic010G021700 Sobic002G307900--Sobic002G391200 Sobic002G307900--Sobic001G308600 Sobic002G307900--Sobic001G314100 Sobic002G307900--Sobic009G096300 Sobic002G307900--Sobic010G006200 Sobic002G307900--Sobic002G122400 Sobic002G307900--Sobic010G139100 Sobic010G021700--Sobic001G301400 Sobic010G021700--Sobic002G307900 Sobic010G021700--Sobic002G391200 Sobic010G021700--Sobic009G096300 Sobic010G021700--Sobic010G174100 Sobic010G021700--Sobic010G139100 Sobic010G021700--Sobic001G314100 Sobic010G021700--Sobic001G308600 Sobic010G021700--Sobic004G323000 Sobic002G391200--Sobic010G021700 Sobic002G391200--Sobic001G301400 Sobic002G391200--Sobic002G307900 Sobic002G391200--Sobic009G096300 Sobic001G464300 Sobic001G464300 Sobic002G391200--Sobic001G464300 Sobic002G391200--Sobic010G174100 Sobic002G082700 Sobic002G082700 Sobic002G391200--Sobic002G082700 Sobic010G115000 Sobic010G115000 Sobic002G391200--Sobic010G115000 Sobic002G391200--Sobic010G139100 Sobic010G174100--Sobic009G096300 Sobic010G174100--Sobic004G323000 Sobic006G171300 Sobic006G171300 Sobic010G174100--Sobic006G171300 Sobic010G174100--Sobic002G391200 Sobic010G174100--Sobic010G139100 Sobic010G174100--Sobic001G301400 Sobic010G174100--Sobic010G021700 Sobic010G174100--Sobic010G115000 Sobic010G174100--Sobic005G161200 Sobic002G122400--Sobic002G412600 Sobic002G122400--Sobic010G006200 Sobic002G003700 Sobic002G003700 Sobic002G122400--Sobic002G003700 Sobic002G122400--Sobic010G146300 Sobic006G150100 Sobic006G150100 Sobic002G122400--Sobic006G150100 Sobic006G170600 Sobic006G170600 Sobic002G122400--Sobic006G170600 Sobic002G122400--Sobic010G139100 Sobic002G122400--Sobic001G293000 Sobic002G122400--Sobic002G307900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.