Gene annotation
Transcriptome id Sobic.010G021700.1
Synonym Sb10g002060
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt C5Z3B2
Pfam PF00026
Panther DB PTHR13683:SF232 PTHR13683
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0004190; aspartic-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G35880 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os06g50390.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049297 , Zm00025a018504 , Zm00025a041385 , Zm00025a041384
Brachypodium PNT75320 , PNT75319 , KQK16726
Barley HORVU7Hr1G118020.11 , HORVU7Hr1G118020.10 , HORVU7Hr1G118020.13 , HORVU7Hr1G118020.12 , HORVU7Hr1G118020.1 , HORVU7Hr1G118020.3 , HORVU7Hr1G118020.2 , HORVU7Hr1G118020.4 , HORVU7Hr1G118020.7 , HORVU7Hr1G118020.9 , HORVU7Hr1G118020.8 , HORVU7Hr1G118020.5 , HORVU7Hr1G118020.6
Wheat TraesCS7D02G524300 , TraesCS7A02G537200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G301400 expansin precursor, putative, expressed -
2 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.002G391200 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.009G096300 ATOFP17/OFP17, putative, expressed -
5 Sobic.010G174100 expressed protein -
6 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
7 Sobic.001G314100 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
9 Sobic.004G323000 SCP-like extracellular protein, expressed -
10 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.001G212451 - -
12 Sobic.005G036900 RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed -
13 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
14 Sobic.002G082700 DUF567 domain containing protein, putative, expressed -
15 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
16 Sobic.010G006200 expansin precursor, putative, expressed -
17 Sobic.005G097600 gibberellin 20 oxidase 2, putative, expressed -
18 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
19 Sobic.006G171300 expansin precursor, putative, expressed -
20 Sobic.007G087600 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic010G021700 Sobic010G021700 Sobic001G301400 Sobic001G301400 Sobic010G021700--Sobic001G301400 Sobic002G307900 Sobic002G307900 Sobic010G021700--Sobic002G307900 Sobic002G391200 Sobic002G391200 Sobic010G021700--Sobic002G391200 Sobic009G096300 Sobic009G096300 Sobic010G021700--Sobic009G096300 Sobic010G174100 Sobic010G174100 Sobic010G021700--Sobic010G174100 Sobic010G139100 Sobic010G139100 Sobic010G021700--Sobic010G139100 Sobic001G314100 Sobic001G314100 Sobic010G021700--Sobic001G314100 Sobic001G308600 Sobic001G308600 Sobic010G021700--Sobic001G308600 Sobic004G323000 Sobic004G323000 Sobic010G021700--Sobic004G323000 Sobic001G301400--Sobic010G021700 Sobic001G301400--Sobic002G307900 Sobic001G301400--Sobic002G391200 Sobic001G301400--Sobic001G314100 Sobic001G301400--Sobic009G096300 Sobic001G301400--Sobic010G174100 Sobic001G301400--Sobic004G323000 Sobic001G301400--Sobic010G139100 Sobic001G301400--Sobic001G308600 Sobic002G307900--Sobic001G301400 Sobic002G307900--Sobic010G021700 Sobic002G307900--Sobic002G391200 Sobic002G307900--Sobic001G308600 Sobic002G307900--Sobic001G314100 Sobic002G307900--Sobic009G096300 Sobic010G006200 Sobic010G006200 Sobic002G307900--Sobic010G006200 Sobic002G122400 Sobic002G122400 Sobic002G307900--Sobic002G122400 Sobic002G307900--Sobic010G139100 Sobic002G391200--Sobic010G021700 Sobic002G391200--Sobic001G301400 Sobic002G391200--Sobic002G307900 Sobic002G391200--Sobic009G096300 Sobic001G464300 Sobic001G464300 Sobic002G391200--Sobic001G464300 Sobic002G391200--Sobic010G174100 Sobic002G082700 Sobic002G082700 Sobic002G391200--Sobic002G082700 Sobic010G115000 Sobic010G115000 Sobic002G391200--Sobic010G115000 Sobic002G391200--Sobic010G139100 Sobic009G096300--Sobic010G174100 Sobic009G096300--Sobic002G391200 Sobic006G171300 Sobic006G171300 Sobic009G096300--Sobic006G171300 Sobic009G096300--Sobic001G301400 Sobic009G096300--Sobic010G021700 Sobic009G096300--Sobic004G323000 Sobic009G096300--Sobic002G307900 Sobic009G096300--Sobic010G115000 Sobic009G096300--Sobic002G082700 Sobic010G174100--Sobic009G096300 Sobic010G174100--Sobic004G323000 Sobic010G174100--Sobic006G171300 Sobic010G174100--Sobic002G391200 Sobic010G174100--Sobic010G139100 Sobic010G174100--Sobic001G301400 Sobic010G174100--Sobic010G021700 Sobic010G174100--Sobic010G115000 Sobic005G161200 Sobic005G161200 Sobic010G174100--Sobic005G161200 Sobic009G032900 Sobic009G032900 Sobic010G139100--Sobic009G032900 Sobic004G351200 Sobic004G351200 Sobic010G139100--Sobic004G351200 Sobic003G269900 Sobic003G269900 Sobic010G139100--Sobic003G269900 Sobic005G216700 Sobic005G216700 Sobic010G139100--Sobic005G216700 Sobic006G135500 Sobic006G135500 Sobic010G139100--Sobic006G135500 Sobic010G139100--Sobic004G323000 Sobic010G139100--Sobic010G115000 Sobic010G139100--Sobic010G174100 Sobic010G158400 Sobic010G158400 Sobic010G139100--Sobic010G158400 Sobic001G338900 Sobic001G338900 Sobic001G314100--Sobic001G338900 Sobic001G314100--Sobic001G301400 Sobic001G314100--Sobic004G323000 Sobic001G314100--Sobic010G006200 Sobic001G314100--Sobic002G307900 Sobic001G314100--Sobic010G021700 Sobic001G314100--Sobic002G391200 Sobic001G314100--Sobic010G174100 Sobic001G314100--Sobic002G122400 Sobic001G308600--Sobic002G307900 Sobic003G059000 Sobic003G059000 Sobic001G308600--Sobic003G059000 Sobic001G308600--Sobic001G301400 Sobic001G308600--Sobic010G021700 Sobic007G087600 Sobic007G087600 Sobic001G308600--Sobic007G087600 Sobic001G308600--Sobic002G122400 Sobic003G132400 Sobic003G132400 Sobic001G308600--Sobic003G132400 Sobic002G329200 Sobic002G329200 Sobic001G308600--Sobic002G329200 Sobic001G308600--Sobic010G006200 Sobic004G323000--Sobic010G174100 Sobic004G323000--Sobic005G161200 Sobic004G323000--Sobic010G139100 Sobic004G323000--Sobic001G314100 Sobic004G323000--Sobic009G096300 Sobic004G323000--Sobic001G301400 Sobic008G158266 Sobic008G158266 Sobic004G323000--Sobic008G158266 Sobic004G323000--Sobic010G021700 Sobic004G323000--Sobic002G391200
Octagon: transcription factors


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